contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA1120203" and tax_phylum = "Thermodesulfobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5378306 | 5378306 | PRJNA1120203_P_NODE_66385_length_276_cov_1.374384_g65369_i0 | PRJNA1120203 | 66385 | 276 | 1.374384 | 3.79329984 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 499 | 7.54e-137 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g65369 | i0 | 99.275 | 2.30434782608696 | 276 | 2 | 100 | 0 | 1 | 276 | 1829541 | 1829266 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 636 | 499 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 5378487 | 5378487 | PRJNA1120203_P_NODE_79405_length_251_cov_0.865169_g78389_i0 | PRJNA1120203 | 79405 | 251 | 0.865169 | 2.17157419 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 263 | 9.65e-66 | NTclustered | gi|1102127722|emb|LT630450.1| | 901 | g78389 | i0 | 86.475 | 1.97211155378486 | 244 | 27 | 97 | 4 | 8 | 251 | 663604 | 663367 | Desulfovibrio piger isolate FI11049 genome assembly, chromosome: I | blastn | 495 | 263 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 6130723 | 6130723 | PRJNA1120203_P_NODE_48805_length_323_cov_4.056000_g47789_i0 | PRJNA1120203 | 48805 | 323 | 4.056 | 13.10088 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 185 | 2.87e-42 | NTclustered | gi|2891482193|emb|OZ219926.1| | 2202153 | g47789 | i0 | 91.241 | 134.157894736842 | 137 | 11 | 42 | 1 | 14 | 149 | 773857 | 773993 | MAG: Thermodesulfobacteriota bacterium isolate 21442c6b-cc68-4f82-8039-a5361455a999 genome assembly, chromosome: 3 | blastn | 43333 | 185 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 8680875 | 8680875 | PRJNA1120203_P_NODE_26707_length_467_cov_8.588832_g25693_i0 | PRJNA1120203 | 26707 | 467 | 8.588832 | 40.10984544 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 279 | 1.91e-70 | NTclustered | gi|2046988434|gb|MZ317661.1| | 885 | g25693 | i0 | 100 | 54.2526766595289 | 151 | 0 | 62 | 0 | 3 | 153 | 461 | 611 | Desulfovibrio sp. strain 15A 16S ribosomal RNA gene, partial sequence | blastn | 25336 | 279 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 9202484 | 9202484 | PRJNA1120203_P_NODE_104768_length_241_cov_0.916667_g103752_i0 | PRJNA1120203 | 104768 | 241 | 0.916667 | 2.20916747 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g103752 | i0 | 99.585 | 400.829875518672 | 241 | 1 | 100 | 0 | 1 | 241 | 761112 | 761352 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 96600 | 440 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 10479025 | 10479025 | PRJNA1120203_P_NODE_78929_length_251_cov_0.865169_g77913_i0 | PRJNA1120203 | 78929 | 251 | 0.865169 | 2.17157419 | Desulfoferula mesophila | 3058419 | Bacteria | Bacteria | 339 | 1.56e-88 | NTclustered | gi|2619692108|dbj|AP028679.1| | 3058419 | g77913 | i0 | 91.463 | 0.9800796812749 | 246 | 21 | 98 | 0 | 6 | 251 | 2900774 | 2900529 | Desulfoferula mesophila 12FAK DNA, complete genome | blastn | 246 | 339 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfoferula | Desulfoferula mesophila | ||
| 10479277 | 10479277 | PRJNA1120203_P_NODE_94809_length_245_cov_0.895349_g93793_i0 | PRJNA1120203 | 94809 | 245 | 0.895349 | 2.19360505 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1102127722|emb|LT630450.1| | 901 | g93793 | i0 | 100 | 2 | 245 | 0 | 100 | 0 | 1 | 245 | 1067057 | 1067301 | Desulfovibrio piger isolate FI11049 genome assembly, chromosome: I | blastn | 490 | 453 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 14303328 | 14303328 | PRJNA1120203_P_NODE_100312_length_243_cov_0.905882_g99296_i0 | PRJNA1120203 | 100312 | 243 | 0.905882 | 2.20129326 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g99296 | i0 | 100 | 2 | 243 | 0 | 100 | 0 | 1 | 243 | 2458686 | 2458928 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 486 | 449 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 14304056 | 14304056 | PRJNA1120203_P_NODE_66352_length_276_cov_1.438424_g65336_i0 | PRJNA1120203 | 66352 | 276 | 1.438424 | 3.97005024 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 505 | 1.62e-138 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g65336 | i0 | 99.638 | 2.11231884057971 | 276 | 1 | 100 | 0 | 1 | 276 | 1799283 | 1799008 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 583 | 505 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 15578246 | 15578246 | PRJNA1120203_P_NODE_82073_length_250_cov_0.870056_g81057_i0 | PRJNA1120203 | 82073 | 250 | 0.870056 | 2.17514 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 457 | 4.1099999999999985e-124 | NTclustered | gi|2108083302|gb|CP070746.1| | 2044940 | g81057 | i0 | 99.6 | 3.276 | 250 | 1 | 100 | 0 | 1 | 250 | 1050336 | 1050087 | MAG: Desulfobacterales bacterium isolate bin36 chromosome | blastn | 819 | 457 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 15578393 | 15578393 | PRJNA1120203_P_NODE_91693_length_246_cov_0.890173_g90677_i0 | PRJNA1120203 | 91693 | 246 | 0.890173 | 2.18982558 | Candidatus Electronema aureum | 2005002 | Bacteria | Bacteria | 331 | 2.55e-86 | NTclustered | gi|2322424202|emb|OW818638.1| | 2005002 | g90677 | i0 | 91.02 | 0.995934959349594 | 245 | 22 | 99 | 0 | 2 | 246 | 1029569 | 1029813 | Candidatus Electronema aureum isolate ENR-cMAG genome assembly, chromosome: 1 | blastn | 245 | 331 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema aureum | ||
| 18127294 | 18127294 | PRJNA1120203_P_NODE_93775_length_245_cov_0.895349_g92759_i0 | PRJNA1120203 | 93775 | 245 | 0.895349 | 2.19360505 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 161 | 3.52e-35 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g92759 | i0 | 80.374 | 0.873469387755102 | 214 | 40 | 87 | 2 | 33 | 245 | 2567285 | 2567073 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 214 | 161 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 20676697 | 20676697 | PRJNA1120203_P_NODE_73697_length_260_cov_1.262032_g72681_i0 | PRJNA1120203 | 73697 | 260 | 1.262032 | 3.2812832 | Candidatus Electronema aureum | 2005002 | Bacteria | Bacteria | 257 | 4.68e-64 | NTclustered | gi|2322424202|emb|OW818638.1| | 2005002 | g72681 | i0 | 85.375 | 0.973076923076923 | 253 | 31 | 96 | 6 | 11 | 260 | 944068 | 943819 | Candidatus Electronema aureum isolate ENR-cMAG genome assembly, chromosome: 1 | blastn | 253 | 257 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema aureum | ||
| 23227707 | 23227707 | PRJNA1120203_P_NODE_81919_length_250_cov_0.870056_g80903_i0 | PRJNA1120203 | 81919 | 250 | 0.870056 | 2.17514 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 457 | 4.1099999999999985e-124 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g80903 | i0 | 99.6 | 2.648 | 250 | 1 | 100 | 0 | 1 | 250 | 1062770 | 1062521 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 662 | 457 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 24500455 | 24500455 | PRJNA1120203_P_NODE_102740_length_242_cov_0.911243_g101724_i0 | PRJNA1120203 | 102740 | 242 | 0.911243 | 2.20520806 | Geobacter sp. FeAm09 | 2597769 | Bacteria | Bacteria | 265 | 2.5699999999999997e-66 | NTclustered | gi|1735471693|gb|CP042466.1| | 2597769 | g101724 | i0 | 86.667 | 0.991735537190083 | 240 | 31 | 99 | 1 | 1 | 240 | 845499 | 845261 | Geobacter sp. FeAm09 chromosome, complete genome | blastn | 240 | 265 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. FeAm09 | ||
| 24501444 | 24501444 | PRJNA1120203_P_NODE_89200_length_247_cov_0.885057_g88184_i0 | PRJNA1120203 | 89200 | 247 | 0.885057 | 2.18609079 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 318 | 1.9899999999999998e-82 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g88184 | i0 | 95.05 | 1.81781376518219 | 202 | 10 | 82 | 0 | 46 | 247 | 2222626 | 2222425 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 449 | 318 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 24501555 | 24501555 | PRJNA1120203_P_NODE_96260_length_244_cov_0.900585_g95244_i0 | PRJNA1120203 | 96260 | 244 | 0.900585 | 2.1974274 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 412 | 8.759999999999998e-111 | NTclustered | gi|1102127722|emb|LT630450.1| | 901 | g95244 | i0 | 97.143 | 4.75819672131148 | 245 | 5 | 100 | 2 | 1 | 244 | 1826706 | 1826463 | Desulfovibrio piger isolate FI11049 genome assembly, chromosome: I | blastn | 1161 | 412 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;