RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1120203" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120203 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9203299 9203299 PRJNA1120203_P_NODE_79108_length_251_cov_0.865169_g78092_i0 PRJNA1120203 79108 251 0.865169 2.17157419 Candidatus Nitrosomarinus catalinensis 1898749 Archaea Archaea 409 1.17e-109   NTclustered gi|1196088602|gb|CP021324.1| 1898749 g78092 i0 96.016 3.00398406374502 251 10 100 0 1 251 179700 179950 Candidatus Nitrosomarinus catalina strain SPOT01 chromosome, complete genome blastn 754 409 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Candidatus Nitrosomarinus Candidatus Nitrosomarinus catalinensis
20677000 20677000 PRJNA1120203_P_NODE_92637_length_246_cov_0.890173_g91621_i0 PRJNA1120203 92637 246 0.890173 2.18982558 Marine Group I thaumarchaeote 2511932 Archaea Archaea 331 2.55e-86   NTclustered gi|2277046463|gb|CP054849.1| 2511932 g91621 i0 91.057 1 246 20 99 2 1 245 595340 595096 MAG: Marine Group I thaumarchaeote isolate JZB445 chromosome blastn 246 331 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
20677069 20677069 PRJNA1120203_P_NODE_97117_length_244_cov_0.900585_g96101_i0 PRJNA1120203 97117 244 0.900585 2.1974274 uncultured Nitrososphaerota archaeon 651141 Archaea Archaea 348 2.51e-91   NTclustered gi|2874253717|emb|OY969559.1| 651141 g96101 i0 92.562 0.991803278688525 242 18 99 0 1 242 901021 901262 MAG: uncultured Nitrososphaerota archaeon isolate MFD05512.bin.c.15 genome assembly, chromosome: 1 blastn 242 348 1 Archaea   Thermoproteati Nitrososphaerota         uncultured Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;