RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1120203" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120203 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2825915 2825915 PRJNA1120203_P_NODE_68163_length_272_cov_1.482412_g67147_i0 PRJNA1120203 68163 272 1.482412 4.03216064 uncultured Cryptomycota 1130064 Fungi Fungi 418 2.14e-112   NTclustered gi|2086101848|gb|MZ923409.1| 1130064 g67147 i0 96.094 92.3639705882353 256 10 94 0 15 270 405 150 Uncultured Cryptomycota clone UMPB-136 small subunit ribosomal RNA gene, partial sequence blastn 25123 418 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota
13028984 13028984 PRJNA1120203_P_NODE_69831_length_268_cov_8.179487_g68815_i0 PRJNA1120203 69831 268 8.179487 21.92102516 Rozella sp. 1932610 Fungi Fungi 460 3.4399999999999997e-125   NTclustered gi|1129625241|gb|KX354831.1| 1932610 g68815 i0 99.603 70.294776119403 252 1 94 0 3 254 239 490 Rozella sp. 18S ribosomal RNA gene, partial sequence blastn 18839 460 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;