RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1120203" and tax_clade = "Marine virus AFVG"

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tax_superkingdom 1

tax_clade 1

  • Marine virus AFVG · 2 ✖

bioproject 1

  • PRJNA1120203 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6653231 6653231 PRJNA1120203_P_NODE_79166_length_251_cov_0.865169_g78150_i0 PRJNA1120203 79166 251 0.865169 2.17157419 Marine virus AFVG_25M460 2694634 Viruses Viruses 283 7.409999999999999e-72   NTclustered gi|1789808766|gb|MN693122.1| 2694634 g78150 i0 88.186 6.72111553784861 237 28 94 0 15 251 32237 32473 MAG: Marine virus AFVG_25M460, complete genome blastn 1687 283 1 Viruses Marine virus AFVG             Marine virus AFVG_25M460
18127298 18127298 PRJNA1120203_P_NODE_93975_length_245_cov_0.895349_g92959_i0 PRJNA1120203 93975 245 0.895349 2.19360505 Marine virus AFVG_25M487 2694663 Viruses Viruses 281 2.59e-71   NTclustered gi|1789808913|gb|MN693269.1| 2694663 g92959 i0 87.347 2.6530612244898 245 31 100 0 1 245 42733 42489 MAG: Marine virus AFVG_25M487, complete genome blastn 650 281 1 Viruses Marine virus AFVG             Marine virus AFVG_25M487

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;