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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
272721 272721 PRJNA1120060_P_NODE_886341_length_312_cov_6.163180_g868413_i0 PRJNA1120060 886341 312 6.16318 19.2291216 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 63.9 1.35e-5   NTclustered gi|937513727|gb|CP012850.1| 1353260 g868413 i0 100 49.6858974358974 34 0 11 0 34 67 600489 600522 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 15502 63.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
1532094 1532094 PRJNA1120060_P_NODE_2944482_length_242_cov_4.378698_g2926388_i0 PRJNA1120060 2944482 242 4.378698 10.59644916 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 52.8 0.022   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g2926388 i0 100 0.115702479338843 28 0 12 0 136 163 1590821 1590848 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
5373124 5373124 PRJNA1120060_P_NODE_704505_length_333_cov_1.419231_g686678_i0 PRJNA1120060 704505 333 1.419231 4.72603923 Candidatus Nitrosopumilus sp. SW 2508726 Archaea Archaea 52.8 0.031   NTclustered gi|1699461107|gb|CP035425.1| 2508726 g686678 i0 100 0.0840840840840841 28 0 8 0 305 332 190716 190689 Candidatus Nitrosopumilus sp. SW chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sp. SW
6129450 6129450 PRJNA1120060_P_NODE_3066765_length_237_cov_5.256098_g3048664_i0 PRJNA1120060 3066765 237 5.256098 12.45695226 Archaea 2157 Archaea Archaea 56.5 0.002   NTclustered gi|663506535|gb|KF900504.1| 1455948 g3048664 i0 100 0.253164556962025 30 0 13 0 161 190 4059 4030 Uncultured marine thaumarchaeote AD1000_96_F07 genomic sequence blastn 60 56.5 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote AD1000_96_F07
6639265 6639265 PRJNA1120060_P_NODE_3279406_length_228_cov_2.238710_g3261298_i0 PRJNA1120060 3279406 228 2.23871 5.1042588 Candidatus Nitrosopelagicus brevis 1410606 Archaea Archaea 56.5 0.002   NTclustered gi|742120812|gb|CP007026.1| 1410606 g3261298 i0 96.97 0.144736842105263 33 1 14 0 110 142 115192 115224 Candidatus Nitrosopelagicus brevis strain CN25, complete genome blastn 33 56.5 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus brevis
7404004 7404004 PRJNA1120060_P_NODE_2534406_length_253_cov_0.866667_g2516334_i0 PRJNA1120060 2534406 253 0.866667 2.19266751 Candidatus Nitrosocaldus 498374 Archaea Archaea 58.4 4.93e-4   NTclustered gi|1336434260|gb|CP024014.1| 2045011 g2516334 i0 97.059 0.399209486166008 34 1 13 0 105 138 1260416 1260383 Candidatus Nitrosocaldus islandicus isolate 3F chromosome, complete genome blastn 101 58.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Candidatus Nitrosocaldales Candidatus Nitrosocaldaceae Candidatus Nitrosocaldus Candidatus Nitrosocaldus islandicus
11230681 11230681 PRJNA1120060_P_NODE_830209_length_316_cov_7.135802_g812297_i0 PRJNA1120060 830209 316 7.135802 22.54913432 root 1 Root_unresolved Root_unresolved 65.8 3.8e-6   NTclustered gi|663514551|gb|KF900727.1| 1456061 g812297 i0 95.238 64.1170886075949 42 0 13 2 239 279 934 974 Uncultured marine thaumarchaeote KM3_179_B04 genomic sequence blastn 20261 65.8 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_179_B04
11734979 11734979 PRJNA1120060_P_NODE_2848830_length_245_cov_0.901163_g2830744_i0 PRJNA1120060 2848830 245 0.901163 2.20784935 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 52.8 0.022   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g2830744 i0 100 0.114285714285714 28 0 11 0 162 189 918684 918657 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
11738179 11738179 PRJNA1120060_P_NODE_3127130_length_235_cov_2.006173_g3109028_i0 PRJNA1120060 3127130 235 2.006173 4.71450655 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 52.8 0.021   NTclustered gi|937513727|gb|CP012850.1| 1353260 g3109028 i0 100 0.119148936170213 28 0 12 0 150 177 764724 764697 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
13780018 13780018 PRJNA1120060_P_NODE_3327611_length_224_cov_4.516556_g3309499_i0 PRJNA1120060 3327611 224 4.516556 10.11708544 Archaea 2157 Archaea Archaea 52.8 0.02   NTclustered gi|167042469|gb|EU016595.1| 455570 g3309499 i0 100 0.4375 28 0 13 0 84 111 27745 27718 Uncultured Group I marine crenarchaea HF4000ANIW133C7 fosmid sequence blastn 98 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     uncultured marine crenarchaeote HF4000_ANIW133C7
14299812 14299812 PRJNA1120060_P_NODE_772372_length_324_cov_1.398406_g754505_i0 PRJNA1120060 772372 324 1.398406 4.53083544 Nitrosopumilus sp. 2024843 Archaea Archaea 52.8 0.03   NTclustered gi|2578657678|emb|OY734802.1| 2024843 g754505 i0 100 0.0864197530864197 28 0 9 0 5 32 997558 997585 MAG: Nitrosopumilus sp. isolate 9424c9fb-5f1c-4746-b453-2997914b57fc genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
21943720 21943720 PRJNA1120060_P_NODE_499638_length_366_cov_5.515358_g482020_i0 PRJNA1120060 499638 366 5.515358 20.18621028 uncultured Candidatus Nitrosopumilus sp. 517606 Archaea Archaea 52.8 0.035   NTclustered gi|2518550870|emb|OX638319.1| 517606 g482020 i0 100 0.0765027322404372 28 0 8 0 79 106 4499 4472 MAG: uncultured Candidatus Nitrosopumilus sp. isolate a9bb1b8d-3405-4f78-8bb0-675615731146 genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus uncultured Candidatus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;