RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
259660 259660 PRJNA1120060_P_NODE_3124201_length_235_cov_2.308642_g3106099_i0 PRJNA1120060 3124201 235 2.308642 5.4253087 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 58.4 4.53e-4   NTclustered gi|2733949631|ref|XM_065459367.1| 3053472 g3106099 i0 100 0.131914893617021 31 0 13 0 10 40 210 240 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135924313 (LOC135924313), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
262854 262854 PRJNA1120060_P_NODE_3408601_length_215_cov_5.521127_g3390481_i0 PRJNA1120060 3408601 215 5.521127 11.87042305 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.019   NTclustered gi|2733947807|ref|XM_065458421.1| 3053472 g3390481 i0 100 0.26046511627907 28 0 13 0 148 175 2894 2921 PREDICTED: Gordionus sp. m RMFG-2023 SWI/SNF complex subunit SMARCC2-like (LOC135923587), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
269531 269531 PRJNA1120060_P_NODE_658721_length_339_cov_3.477444_g640937_i0 PRJNA1120060 658721 339 3.477444 11.78853516 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 56.5 0.002   NTclustered gi|2733951422|ref|XR_010571512.1| 3053472 g640937 i0 94.595 0.218289085545723 37 0 11 2 113 148 209 244 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135925066 (LOC135925066), transcript variant X1, ncRNA blastn 74 56.5 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
10449970 10449970 PRJNA1120060_P_NODE_2057389_length_270_cov_3.142132_g2039352_i0 PRJNA1120060 2057389 270 3.142132 8.4837564 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 62.1 4.11e-5   NTclustered gi|2733956693|ref|XM_065462799.1| 3053472 g2039352 i0 97.297 0.137037037037037 37 0 14 1 88 124 366 331 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135926866 (LOC135926866), mRNA blastn 37 62.1 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
14261539 14261539 PRJNA1120060_P_NODE_1081292_length_311_cov_3.386555_g1063357_i0 PRJNA1120060 1081292 311 3.386555 10.53218605 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 62.1 4.83e-5   NTclustered gi|2733956693|ref|XM_065462799.1| 3053472 g1063357 i0 97.297 0.118971061093248 37 0 12 1 178 214 331 366 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135926866 (LOC135926866), mRNA blastn 37 62.1 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
14267751 14267751 PRJNA1120060_P_NODE_1491692_length_294_cov_1.031674_g1473705_i0 PRJNA1120060 1491692 294 1.031674 3.03312156 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 56.5 0.002   NTclustered gi|2733955406|ref|XM_065462165.1| 3053472 g1473705 i0 94.595 0.125850340136054 37 0 12 2 30 64 538 574 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135926328 (LOC135926328), mRNA blastn 37 56.5 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
23191986 23191986 PRJNA1120060_P_NODE_1566339_length_290_cov_3.350230_g1548347_i0 PRJNA1120060 1566339 290 3.35023 9.715667 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 54.7 0.007   NTclustered gi|2733966066|ref|XM_065467402.1| 3053472 g1548347 i0 96.97 0.113793103448276 33 0 11 1 179 210 2751 2719 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135930571 (LOC135930571), mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;