RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
246869 246869 PRJNA1120060_P_NODE_2085901_length_269_cov_2.612245_g2067861_i0 PRJNA1120060 2085901 269 2.612245 7.02693905 Ordospora pajunii 3039483 Fungi Fungi 54.7 0.007   NTclustered gi|2607435997|ref|XM_060420296.1| 3039483 g2067861 i0 100 0.107806691449814 29 0 11 0 50 78 142 170 Ordospora pajunii uncharacterized protein (HK407_02g02970), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Ordosporidae Ordospora Ordospora pajunii
11727478 11727478 PRJNA1120060_P_NODE_2236710_length_263_cov_3.763158_g2218656_i0 PRJNA1120060 2236710 263 3.763158 9.89710554 Vairimorpha necatrix 6039 Fungi Fungi 52.8 0.024   NTclustered gi|2735582712|ref|XM_065472566.1| 6039 g2218656 i0 100 0.106463878326996 28 0 11 0 21 48 333 360 Vairimorpha necatrix V-type proton ATPase subunit H (VMA13) (VNE69_02020), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
12988214 12988214 PRJNA1120060_P_NODE_1199711_length_310_cov_3.097046_g1181771_i0 PRJNA1120060 1199711 310 3.097046 9.6008426 Vairimorpha necatrix 6039 Fungi Fungi 52.8 0.029   NTclustered gi|2735585326|ref|XM_065473864.1| 6039 g1181771 i0 94.118 0.109677419354839 34 2 11 0 82 115 807 840 Vairimorpha necatrix uncharacterized protein (VNE69_06111), partial mRNA blastn 34 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;