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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7404411 7404411 PRJNA1120060_P_NODE_3144046_length_234_cov_2.484472_g3125942_i0 PRJNA1120060 3144046 234 2.484472 5.81366448 Pseudomonadati 3379134 Bacteria Bacteria 305 1.46e-78   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g3125942 i0 90.476 51.8034188034188 231 22 99 0 4 234 1073935 1073705 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 12122 305 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
7902180 7902180 PRJNA1120060_P_NODE_2267747_length_262_cov_2.788360_g2249692_i0 PRJNA1120060 2267747 262 2.78836 7.3055032 Ignavibacteria bacterium 2053306 Bacteria Bacteria 54.7 0.007   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g2249692 i0 100 0.110687022900763 29 0 11 0 124 152 2061735 2061763 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
9200773 9200773 PRJNA1120060_P_NODE_899988_length_312_cov_4.514644_g882059_i0 PRJNA1120060 899988 312 4.514644 14.08568928 Ignavibacteria bacterium 2053306 Bacteria Bacteria 52.8 0.029   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g882059 i0 100 0.0897435897435897 28 0 9 0 103 130 460227 460254 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
14297875 14297875 PRJNA1120060_P_NODE_636552_length_342_cov_10.992565_g618787_i0 PRJNA1120060 636552 342 10.992565 37.5945723 Ignavibacteria bacterium 2053306 Bacteria Bacteria 52.8 0.032   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g618787 i0 100 0.0818713450292398 28 0 8 0 135 162 1604343 1604316 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
16818720 16818720 PRJNA1120060_P_NODE_1700634_length_285_cov_1.462264_g1682630_i0 PRJNA1120060 1700634 285 1.462264 4.1674524 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 54.7 0.007   NTclustered gi|2874253742|emb|OY969585.1| 2026749 g1682630 i0 100 0.101754385964912 29 0 10 0 200 228 1605052 1605024 MAG: Ignavibacteriota bacterium isolate MFD03726.bin.c.11 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
16828199 16828199 PRJNA1120060_P_NODE_2399754_length_257_cov_3.277174_g2381686_i0 PRJNA1120060 2399754 257 3.277174 8.42233718 Ignavibacteria bacterium 2053306 Bacteria Bacteria 54.7 0.006   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g2381686 i0 94.444 0.140077821011673 36 0 14 2 65 100 1328343 1328310 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 36 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
16828392 16828392 PRJNA1120060_P_NODE_2414654_length_257_cov_1.434783_g2396586_i0 PRJNA1120060 2414654 257 1.434783 3.68739231 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621704225|emb|OY761615.1| 2651163 g2396586 i0 100 0.108949416342412 28 0 11 0 224 251 5534182 5534155 MAG: Ignavibacteriaceae bacterium isolate 0c874fb2-9291-49ee-bde1-826c4484edf3 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
16851329 16851329 PRJNA1120060_P_NODE_972354_length_312_cov_2.866109_g954425_i0 PRJNA1120060 972354 312 2.866109 8.94226008 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 52.8 0.029   NTclustered gi|2874253742|emb|OY969585.1| 2026749 g954425 i0 100 0.0897435897435897 28 0 9 0 112 139 1227976 1227949 MAG: Ignavibacteriota bacterium isolate MFD03726.bin.c.11 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
18109541 18109541 PRJNA1120060_P_NODE_29695_length_885_cov_4.352217_g20831_i0 PRJNA1120060 29695 885 4.352217 38.51712045 Ignavibacteria bacterium 2053306 Bacteria Bacteria 54.7 0.025   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g20831 i0 100 0.0327683615819209 29 0 3 0 69 97 2061735 2061763 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
19366600 19366600 PRJNA1120060_P_NODE_163056_length_495_cov_3.672986_g147017_i0 PRJNA1120060 163056 495 3.672986 18.1812807 Ignavibacterium sp. 2651167 Bacteria Bacteria 54.7 0.013   NTclustered gi|2314740639|dbj|AP026678.1| 2651167 g147017 i0 94.444 0.0727272727272727 36 1 7 1 347 381 2380685 2380720 MAG: Ignavibacterium sp. KatS3mg037 DNA, complete genome blastn 36 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
20644914 20644914 PRJNA1120060_P_NODE_1855957_length_278_cov_3.804878_g1837941_i0 PRJNA1120060 1855957 278 3.804878 10.57756084 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 54.7 0.007   NTclustered gi|2556932299|gb|CP129491.1| 2651163 g1837941 i0 100 0.827338129496403 29 0 10 0 68 96 74478 74506 MAG: Ignavibacteriaceae bacterium isolate cMAG.5 chromosome, complete genome blastn 230 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;