contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9173229 | 9173229 | PRJNA1120060_P_NODE_1975868_length_273_cov_8.160000_g1957840_i0 | PRJNA1120060 | 1975868 | 273 | 8.16 | 22.2768 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 313 | 1.04e-80 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g1957840 | i0 | 87.97 | 75.9487179487179 | 266 | 30 | 97 | 2 | 6 | 270 | 399297 | 399033 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 20734 | 313 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9184226 | 9184226 | PRJNA1120060_P_NODE_2849448_length_245_cov_0.901163_g2831362_i0 | PRJNA1120060 | 2849448 | 245 | 0.901163 | 2.20784935 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 58.4 | 4.75e-4 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g2831362 | i0 | 100 | 0.126530612244898 | 31 | 0 | 13 | 0 | 168 | 198 | 5654556 | 5654526 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 31 | 58.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9192203 | 9192203 | PRJNA1120060_P_NODE_3576408_length_200_cov_8.661417_g3558281_i0 | PRJNA1120060 | 3576408 | 200 | 8.661417 | 17.322834 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 281 | 2.04e-71 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g3558281 | i0 | 92 | 37.765 | 200 | 16 | 100 | 0 | 1 | 200 | 1060128 | 1060327 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 7553 | 281 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 10467552 | 10467552 | PRJNA1120060_P_NODE_3537049_length_203_cov_16.053846_g3518922_i0 | PRJNA1120060 | 3537049 | 203 | 16.053846 | 32.58930738 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 204 | 4.619999999999999e-48 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g3518922 | i0 | 84.804 | 1.00492610837438 | 204 | 29 | 100 | 2 | 1 | 203 | 1051956 | 1051754 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 204 | 204 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 18115767 | 18115767 | PRJNA1120060_P_NODE_3524855_length_204_cov_15.641221_g3506728_i0 | PRJNA1120060 | 3524855 | 204 | 15.641221 | 31.90809084 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 156 | 1.32e-33 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g3506728 | i0 | 81.538 | 0.955882352941177 | 195 | 30 | 94 | 4 | 13 | 204 | 4609445 | 4609636 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 195 | 156 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 20659029 | 20659029 | PRJNA1120060_P_NODE_2977557_length_242_cov_0.917160_g2959463_i0 | PRJNA1120060 | 2977557 | 242 | 0.91716 | 2.2195272 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 206 | 1.58e-48 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g2959463 | i0 | 86.01 | 66.1280991735537 | 193 | 25 | 79 | 2 | 48 | 239 | 591760 | 591951 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 16003 | 206 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 23202596 | 23202596 | PRJNA1120060_P_NODE_2334159_length_260_cov_1.342246_g2316099_i0 | PRJNA1120060 | 2334159 | 260 | 1.342246 | 3.4898396 | Gemmatimonas aurantiaca | 173480 | Bacteria | Bacteria | 283 | 7.719999999999999e-72 | NTclustered | gi|226088597|dbj|AP009153.1| | 379066 | g2316099 | i0 | 86.486 | 86.6807692307692 | 259 | 33 | 99 | 2 | 1 | 258 | 4433472 | 4433729 | Gemmatimonas aurantiaca T-27 DNA, complete genome | blastn | 22537 | 283 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 24473777 | 24473777 | PRJNA1120060_P_NODE_2144260_length_267_cov_1.809278_g2126214_i0 | PRJNA1120060 | 2144260 | 267 | 1.809278 | 4.83077226 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 182 | 2.99e-41 | NTclustered | gi|575461033|gb|CP007129.1| | 861299 | g2126214 | i0 | 83.938 | 1.14606741573034 | 193 | 27 | 72 | 4 | 77 | 267 | 669360 | 669170 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence | blastn | 306 | 182 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;