contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1535119 | 1535119 | PRJNA1120060_P_NODE_3209502_length_231_cov_2.493671_g3191395_i0 | PRJNA1120060 | 3209502 | 231 | 2.493671 | 5.76038001 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 156 | 1.53e-33 | NTclustered | gi|2874253725|emb|OY969567.1| | 1672391 | g3191395 | i0 | 79.909 | 1.42857142857143 | 219 | 39 | 94 | 4 | 16 | 231 | 1514577 | 1514793 | MAG: uncultured Chloroflexia bacterium isolate MFD01561.bin.c.1 genome assembly, chromosome: 1 | blastn | 330 | 156 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 3576925 | 3576925 | PRJNA1120060_P_NODE_2731243_length_247_cov_9.149425_g2713159_i0 | PRJNA1120060 | 2731243 | 247 | 9.149425 | 22.59907975 | Bacteria | 2 | Bacteria | Bacteria | 272 | 1.5699999999999999e-68 | NTclustered | gi|2874253812|emb|OY969796.1| | 1672391 | g2713159 | i0 | 86.885 | 94.4939271255061 | 244 | 30 | 98 | 2 | 3 | 245 | 151180 | 150938 | MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 | blastn | 23340 | 272 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 4076593 | 4076593 | PRJNA1120060_P_NODE_2294004_length_261_cov_2.845745_g2275945_i0 | PRJNA1120060 | 2294004 | 261 | 2.845745 | 7.42739445 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2621703647|emb|OY762633.1| | 2026734 | g2275945 | i0 | 100 | 0.111111111111111 | 29 | 0 | 11 | 0 | 191 | 219 | 2146184 | 2146156 | MAG: Dehalococcoidia bacterium isolate 17254eae-7cb3-4ac9-839e-465292e2b3d4 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 7909732 | 7909732 | PRJNA1120060_P_NODE_2887387_length_244_cov_0.912281_g2869298_i0 | PRJNA1120060 | 2887387 | 244 | 0.912281 | 2.22596564 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 285 | 1.99e-72 | NTclustered | gi|2874253835|emb|OY969885.1| | 1672391 | g2869298 | i0 | 87.805 | 11.0532786885246 | 246 | 26 | 100 | 4 | 1 | 244 | 1253708 | 1253465 | MAG: uncultured Chloroflexia bacterium isolate MFD01275.bin.c.5 genome assembly, chromosome: 1 | blastn | 2697 | 285 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 15557799 | 15557799 | PRJNA1120060_P_NODE_2727613_length_248_cov_0.885714_g2709530_i0 | PRJNA1120060 | 2727613 | 248 | 0.885714 | 2.19657072 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2621702714|emb|OY759598.1| | 2026734 | g2709530 | i0 | 100 | 0.112903225806452 | 28 | 0 | 11 | 0 | 166 | 193 | 709415 | 709442 | MAG: Dehalococcoidia bacterium isolate 9e3974e8-1b76-4a2a-ace1-a6b9f67a3735 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 16808779 | 16808779 | PRJNA1120060_P_NODE_102634_length_565_cov_4.184959_g88068_i0 | PRJNA1120060 | 102634 | 565 | 4.184959 | 23.64501835 | Ktedonobacterales bacterium | 2306968 | Bacteria | Bacteria | 62.1 | 9.25e-5 | NTclustered | gi|2513924934|gb|CP126532.1| | 2306968 | g88068 | i0 | 97.222 | 0.80353982300885 | 36 | 1 | 6 | 0 | 324 | 359 | 3416767 | 3416802 | MAG: Ktedonobacterales bacterium isolate bin_006 chromosome, complete genome | blastn | 454 | 62.1 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Ktedonobacterales bacterium | ||||
| 18093764 | 18093764 | PRJNA1120060_P_NODE_1736275_length_283_cov_3.452381_g1718267_i0 | PRJNA1120060 | 1736275 | 283 | 3.452381 | 9.77023823 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2621703217|emb|OY762409.1| | 2026734 | g1718267 | i0 | 100 | 0.0989399293286219 | 28 | 0 | 10 | 0 | 27 | 54 | 485421 | 485448 | MAG: Dehalococcoidia bacterium isolate 38c4f93b-5868-4cd3-8e0a-f10fb6dda0e3 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 20649875 | 20649875 | PRJNA1120060_P_NODE_2222497_length_264_cov_1.821990_g2204444_i0 | PRJNA1120060 | 2222497 | 264 | 1.82199 | 4.8100536 | Anaerolinea thermophila | 167964 | Bacteria | Bacteria | 488 | 1.5499999999999999e-133 | NTclustered | gi|319993263|dbj|AP012029.1| | 926569 | g2204444 | i0 | 100 | 1 | 264 | 0 | 100 | 0 | 1 | 264 | 1777459 | 1777722 | Anaerolinea thermophila UNI-1 DNA, complete genome | blastn | 264 | 488 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolinea | Anaerolinea thermophila | ||
| 21910745 | 21910745 | PRJNA1120060_P_NODE_1167538_length_310_cov_8.708861_g1149599_i0 | PRJNA1120060 | 1167538 | 310 | 8.708861 | 26.9974691 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 137 | 7.77e-28 | NTclustered | gi|2891482201|emb|OZ219934.1| | 2026734 | g1149599 | i0 | 83.221 | 19.4290322580645 | 149 | 25 | 48 | 0 | 160 | 308 | 68312 | 68460 | MAG: Dehalococcoidia bacterium isolate d5105c1e-37dd-4811-a55b-ed3c3c49e222 genome assembly, chromosome: 8 | blastn | 6023 | 137 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 21913952 | 21913952 | PRJNA1120060_P_NODE_1380478_length_298_cov_7.822222_g1362498_i0 | PRJNA1120060 | 1380478 | 298 | 7.822222 | 23.31022156 | Thermobaculum terrenum | 166501 | Bacteria | Bacteria | 122 | 2.0799999999999994e-23 | NTclustered | gi|269790643|gb|CP001826.1| | 525904 | g1362498 | i0 | 81.633 | 2.4496644295302 | 147 | 27 | 49 | 0 | 152 | 298 | 101124 | 100978 | Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete sequence | blastn | 730 | 122 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 21921147 | 21921147 | PRJNA1120060_P_NODE_1901198_length_276_cov_8.886700_g1883176_i0 | PRJNA1120060 | 1901198 | 276 | 8.8867 | 24.527292 | Tepidiformaceae bacterium | 3022862 | Bacteria | Bacteria | 84.2 | 9e-12 | NTclustered | gi|2893356066|emb|OZ220489.1| | 3022862 | g1883176 | i0 | 84.524 | 0.485507246376812 | 84 | 13 | 30 | 0 | 1 | 84 | 1856946 | 1857029 | MAG: Tepidiformaceae bacterium isolate fe7a5560-ebd3-4005-b60b-c4614588a40b genome assembly, chromosome: 1 | blastn | 134 | 84.2 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiformaceae bacterium | |||
| 23189565 | 23189565 | PRJNA1120060_P_NODE_1400879_length_298_cov_1.782222_g1382899_i0 | PRJNA1120060 | 1400879 | 298 | 1.782222 | 5.31102156 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2621701347|emb|OY760067.1| | 2073117 | g1382899 | i0 | 96.875 | 0.10738255033557 | 32 | 0 | 10 | 1 | 100 | 130 | 931102 | 931071 | MAG: Anaerolineales bacterium isolate e1712b75-d4f6-4c5e-bc49-bbfdc0d5b476 genome assembly, chromosome: 2 | blastn | 32 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;