RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
265587 265587 PRJNA1120060_P_NODE_39901_length_782_cov_4.537377_g29595_i0 PRJNA1120060 39901 782 4.537377 35.48228814 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.022   NTclustered gi|194476495|ref|NC_011087.1| 39717 g29595 i0 100 0.0370843989769821 29 0 4 0 21 49 150896 150924 Paulinella chromatophora chromatophore, complete genome blastn 29 54.7 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
5339093 5339093 PRJNA1120060_P_NODE_129885_length_528_cov_3.936264_g16471_i2 PRJNA1120060 129885 528 3.936264 20.78347392 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.014   NTclustered gi|194476495|ref|NC_011087.1| 39717 g16471 i2 100 0.0549242424242424 29 0 5 0 337 365 150896 150924 Paulinella chromatophora chromatophore, complete genome blastn 29 54.7 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;