RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7913220 7913220 PRJNA1120060_P_NODE_3194767_length_231_cov_5.892405_g3176660_i0 PRJNA1120060 3194767 231 5.892405 13.61145555 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 344 3.04e-90   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g3176660 i0 93.506 1 231 15 100 0 1 231 1553239 1553469 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 231 344 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
10435872 10435872 PRJNA1120060_P_NODE_1073909_length_311_cov_3.550420_g1055974_i0 PRJNA1120060 1073909 311 3.55042 11.0418062 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 56.5 0.002   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g1055974 i0 100 0.0964630225080386 30 0 10 0 89 118 1513017 1513046 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
15575872 15575872 PRJNA1120060_P_NODE_911133_length_312_cov_4.016736_g893204_i0 PRJNA1120060 911133 312 4.016736 12.53221632 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 56.5 0.002   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g893204 i0 96.97 0.105769230769231 33 1 11 0 196 228 1267733 1267765 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 33 56.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
18125295 18125295 PRJNA1120060_P_NODE_944455_length_312_cov_3.251046_g926526_i0 PRJNA1120060 944455 312 3.251046 10.14326352 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 54.7 0.008   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g926526 i0 88.889 0.144230769230769 45 3 14 2 208 252 25615 25573 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 45 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
21930379 21930379 PRJNA1120060_P_NODE_260438_length_436_cov_1.490358_g243561_i0 PRJNA1120060 260438 436 1.490358 6.49796088 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 56.5 0.003   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g243561 i0 100 0.0688073394495413 30 0 7 0 390 419 49590 49619 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 30 56.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;