RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Heimdallarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Heimdallarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9172709 9172709 PRJNA1120060_P_NODE_1939548_length_275_cov_2.034653_g1921524_i0 PRJNA1120060 1939548 275 2.034653 5.59529575 Candidatus Heimdallarchaeum aukensis 2876573 Archaea Archaea 54.7 0.007   NTclustered gi|2180467162|gb|CP084166.1| 2876573 g1921524 i0 100 0.105454545454545 29 0 11 0 233 261 1210507 1210479 MAG: Candidatus Heimdallarchaeum aukensis isolate PM71 chromosome, complete genome blastn 29 54.7 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum aukensis
15541986 15541986 PRJNA1120060_P_NODE_1529553_length_292_cov_1.899543_g1511564_i0 PRJNA1120060 1529553 292 1.899543 5.54666556 Candidatus Heimdallarchaeum endolithica 2876572 Archaea Archaea 52.8 0.027   NTclustered gi|2180470024|gb|CP084167.1| 2876572 g1511564 i0 100 0.0958904109589041 28 0 10 0 71 98 261398 261425 MAG: Candidatus Heimdallarchaeum endolithica isolate PR6 chromosome, complete genome blastn 28 52.8 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum endolithica
18093678 18093678 PRJNA1120060_P_NODE_1729655_length_284_cov_1.099526_g1711649_i0 PRJNA1120060 1729655 284 1.099526 3.12265384 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 54.7 0.007   NTclustered gi|2108233595|gb|CP070695.1| 2026747 g1711649 i0 100 0.102112676056338 29 0 10 0 134 162 2663393 2663365 MAG: Candidatus Heimdallarchaeota archaeon isolate bin6 chromosome blastn 29 54.7 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;