contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Brachiopoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2820427 | 2820427 | PRJNA1120060_P_NODE_685083_length_335_cov_4.393130_g667270_i0 | PRJNA1120060 | 685083 | 335 | 4.39313 | 14.7169855 | Lingula anatina | 7574 | Brachiopoda | other_Eukaryota | 52.8 | 0.032 | NTclustered | gi|1351491617|ref|XM_013564689.2| | 7574 | g667270 | i0 | 100 | 0.0835820895522388 | 28 | 0 | 8 | 0 | 304 | 331 | 2490 | 2463 | PREDICTED: Lingula anatina nucleolar GTP-binding protein 2 (LOC106180653), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Brachiopoda | Lingulata | Lingulida | Lingulidae | Lingula | Lingula anatina | |
| 13009892 | 13009892 | PRJNA1120060_P_NODE_2837111_length_245_cov_1.639535_g2819025_i0 | PRJNA1120060 | 2837111 | 245 | 1.639535 | 4.01686075 | Lingula anatina | 7574 | Brachiopoda | other_Eukaryota | 54.7 | 0.006 | NTclustered | gi|919042547|ref|XM_013549074.1| | 7574 | g2819025 | i0 | 100 | 0.118367346938776 | 29 | 0 | 12 | 0 | 177 | 205 | 966 | 938 | PREDICTED: Lingula anatina histone H1-delta (LOC106169582), mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Brachiopoda | Lingulata | Lingulida | Lingulidae | Lingula | Lingula anatina | |
| 15537140 | 15537140 | PRJNA1120060_P_NODE_1200073_length_310_cov_3.084388_g1182133_i0 | PRJNA1120060 | 1200073 | 310 | 3.084388 | 9.5616028 | Lingula anatina | 7574 | Brachiopoda | other_Eukaryota | 52.8 | 0.029 | NTclustered | gi|919001440|ref|XM_013552637.1| | 7574 | g1182133 | i0 | 92.105 | 0.12258064516129 | 38 | 1 | 12 | 2 | 165 | 202 | 3862 | 3827 | PREDICTED: Lingula anatina centrobin (LOC106172050), transcript variant X1, mRNA | blastn | 38 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Brachiopoda | Lingulata | Lingulida | Lingulidae | Lingula | Lingula anatina | |
| 16825451 | 16825451 | PRJNA1120060_P_NODE_2191274_length_265_cov_2.453125_g2173222_i0 | PRJNA1120060 | 2191274 | 265 | 2.453125 | 6.50078125 | Lingula anatina | 7574 | Brachiopoda | other_Eukaryota | 52.8 | 0.024 | NTclustered | gi|919076405|ref|XM_013563835.1| | 7574 | g2173222 | i0 | 100 | 0.316981132075472 | 28 | 0 | 11 | 0 | 74 | 101 | 634 | 607 | PREDICTED: Lingula anatina uncharacterized LOC106179994 (LOC106179994), transcript variant X2, mRNA | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Brachiopoda | Lingulata | Lingulida | Lingulidae | Lingula | Lingula anatina | |
| 24482248 | 24482248 | PRJNA1120060_P_NODE_2829680_length_245_cov_2.325581_g2811594_i0 | PRJNA1120060 | 2829680 | 245 | 2.325581 | 5.69767345 | Lingula anatina | 7574 | Brachiopoda | other_Eukaryota | 54.7 | 0.006 | NTclustered | gi|919001440|ref|XM_013552637.1| | 7574 | g2811594 | i0 | 94.444 | 0.146938775510204 | 36 | 1 | 15 | 1 | 89 | 124 | 3835 | 3869 | PREDICTED: Lingula anatina centrobin (LOC106172050), transcript variant X1, mRNA | blastn | 36 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Brachiopoda | Lingulata | Lingulida | Lingulidae | Lingula | Lingula anatina |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;