RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14283977 14283977 PRJNA1120060_P_NODE_2724052_length_248_cov_0.891429_g2705969_i0 PRJNA1120060 2724052 248 0.891429 2.21074392 Balneolaceae bacterium 2053516 Bacteria Bacteria 52.8 0.022   NTclustered gi|2626222457|emb|OY829281.1| 2053516 g2705969 i0 100 0.112903225806452 28 0 11 0 26 53 2252214 2252187 MAG: Balneolaceae bacterium isolate c63fa63d-abcb-44aa-a049-ecdd770e9aed genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
20642955 20642955 PRJNA1120060_P_NODE_1711177_length_284_cov_3.763033_g1693171_i0 PRJNA1120060 1711177 284 3.763033 10.68701372 Balneola sp. 2024824 Bacteria Bacteria 52.8 0.026   NTclustered gi|2021960826|gb|CP051255.1| 2024824 g1693171 i0 100 0.0985915492957746 28 0 10 0 221 248 3144215 3144242 MAG: Balneola sp. isolate EhC07 chromosome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
20668155 20668155 PRJNA1120060_P_NODE_491197_length_368_cov_3.376271_g473587_i0 PRJNA1120060 491197 368 3.376271 12.42467728 Balneola sp. 2024824 Bacteria Bacteria 52.8 0.035   NTclustered gi|2021960826|gb|CP051255.1| 2024824 g473587 i0 100 0.0760869565217391 28 0 8 0 144 171 3860085 3860058 MAG: Balneola sp. isolate EhC07 chromosome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;