contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA1120060" and tax_kingdom = "Shotokuvirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 274485 | 274485 | PRJNA1120060_P_NODE_998941_length_312_cov_2.569038_g981012_i0 | PRJNA1120060 | 998941 | 312 | 2.569038 | 8.01539856 | Alphatorquevirus sp. | 2809145 | Viruses | Viruses | 52.8 | 0.029 | NTclustered | gi|2894906387|tpg|BK069140.1| | 2809145 | g981012 | i0 | 100 | 0.0897435897435897 | 28 | 0 | 9 | 0 | 77 | 104 | 878 | 905 | MAG TPA_asm: Alphatorquevirus sp. isolate SRR2037084_NODE_1060 genomic sequence | blastn | 28 | 52.8 | 1 | Viruses | Shotokuvirae | Commensaviricota | Cardeaviricetes | Sanitavirales | Anelloviridae | Alphatorquevirus | Alphatorquevirus sp. | ||
| 1542355 | 1542355 | PRJNA1120060_P_NODE_552982_length_356_cov_4.424028_g535304_i0 | PRJNA1120060 | 552982 | 356 | 4.424028 | 15.74953968 | Grapevine geminivirus A defective DNA | 1928761 | Viruses | Viruses | 56.5 | 0.003 | NTclustered | gi|1898523535|gb|MT344724.1| | 1928761 | g535304 | i0 | 100 | 0.168539325842697 | 30 | 0 | 8 | 0 | 90 | 119 | 1307 | 1278 | Grapevine geminivirus A defective DNA isolate def2019YM4, complete genome | blastn | 60 | 56.5 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Repensiviricetes | Geplafuvirales | Geminiviridae | Grapevine geminivirus A defective DNA | |||
| 2818481 | 2818481 | PRJNA1120060_P_NODE_553543_length_356_cov_3.787986_g535865_i0 | PRJNA1120060 | 553543 | 356 | 3.787986 | 13.48523016 | Human papillomavirus | 10566 | Viruses | Viruses | 636 | 7.31e-178 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g535865 | i0 | 98.876 | 1.13483146067416 | 356 | 4 | 100 | 0 | 1 | 356 | 6912 | 6557 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 404 | 636 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 4070392 | 4070392 | PRJNA1120060_P_NODE_1830444_length_279_cov_4.116505_g1812429_i0 | PRJNA1120060 | 1830444 | 279 | 4.116505 | 11.48504895 | Alphapapillomavirus 7 | 337042 | Viruses | Viruses | 52.8 | 0.026 | NTclustered | gi|1206430579|gb|KY565612.1| | 10593 | g1812429 | i0 | 100 | 0.100358422939068 | 28 | 0 | 10 | 0 | 7 | 34 | 728 | 701 | Human papillomavirus 45 isolate 509_RJ E6 gene, complete cds; and E7 gene, partial cds | blastn | 28 | 52.8 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 7 | ||
| 5338339 | 5338339 | PRJNA1120060_P_NODE_1250925_length_309_cov_2.919492_g1232984_i0 | PRJNA1120060 | 1250925 | 309 | 2.919492 | 9.02123028 | Alphapapillomavirus 3 | 333767 | Viruses | Viruses | 52.8 | 0.029 | NTclustered | gi|289656451|gb|GQ244463.1| | 735496 | g1232984 | i0 | 100 | 0.0906148867313916 | 28 | 0 | 9 | 0 | 185 | 212 | 2574 | 2547 | Human papillomavirus type 114, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 3 | ||
| 5356990 | 5356990 | PRJNA1120060_P_NODE_261345_length_435_cov_3.635359_g244454_i0 | PRJNA1120060 | 261345 | 435 | 3.635359 | 15.81381165 | TTV-like mini virus | 93678 | Viruses | Viruses | 52.8 | 0.042 | NTclustered | gi|2164987747|gb|MN771414.1| | 93678 | g244454 | i0 | 100 | 0.064367816091954 | 28 | 0 | 6 | 0 | 20 | 47 | 1952 | 1979 | MAG: TTV-like mini virus isolate SAfiA-350-43, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Shotokuvirae | Commensaviricota | Cardeaviricetes | Sanitavirales | Anelloviridae | Betatorquevirus | TTV-like mini virus | ||
| 5360578 | 5360578 | PRJNA1120060_P_NODE_2936965_length_243_cov_0.905882_g2918872_i0 | PRJNA1120060 | 2936965 | 243 | 0.905882 | 2.20129326 | Ficedula mugimaki CRESS-DNA-virus sp. | 2815035 | Viruses | Viruses | 58.4 | 4.71e-4 | NTclustered | gi|2015371934|gb|MW182753.1| | 2815035 | g2918872 | i0 | 94.737 | 0.156378600823045 | 38 | 1 | 16 | 1 | 25 | 62 | 2140 | 2104 | MAG: Ficedula mugimaki CRESS-DNA-virus sp. isolate muf159cir1 genomic sequence | blastn | 38 | 58.4 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Ficedula mugimaki CRESS-DNA-virus sp. | ||||||
| 5363901 | 5363901 | PRJNA1120060_P_NODE_3224625_length_230_cov_3.382166_g3206518_i0 | PRJNA1120060 | 3224625 | 230 | 3.382166 | 7.7789818 | Human papillomavirus | 10566 | Viruses | Viruses | 420 | 4.89e-113 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g3206518 | i0 | 99.565 | 1.9304347826087 | 230 | 1 | 100 | 0 | 1 | 230 | 3542 | 3313 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 444 | 420 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 6620097 | 6620097 | PRJNA1120060_P_NODE_1740226_length_283_cov_2.600000_g1722218_i0 | PRJNA1120060 | 1740226 | 283 | 2.6 | 7.358 | Human papillomavirus | 10566 | Viruses | Viruses | 363 | 1.0599999999999999e-95 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g1722218 | i0 | 99.497 | 1 | 199 | 1 | 100 | 0 | 85 | 283 | 7149 | 6951 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 283 | 363 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 6627610 | 6627610 | PRJNA1120060_P_NODE_2299186_length_261_cov_2.138298_g2281127_i0 | PRJNA1120060 | 2299186 | 261 | 2.138298 | 5.58095778 | Gammapapillomavirus 11 | 1513256 | Viruses | Viruses | 483 | 7.12e-132 | NTclustered | gi|389656408|ref|NC_017994.1| | 1070409 | g2281127 | i0 | 100 | 1.98850574712644 | 261 | 0 | 100 | 0 | 1 | 261 | 649 | 909 | Human papillomavirus type 136, complete genome | blastn | 519 | 483 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Gammapapillomavirus | Gammapapillomavirus 11 | ||
| 7900993 | 7900993 | PRJNA1120060_P_NODE_2179427_length_265_cov_9.145833_g2161375_i0 | PRJNA1120060 | 2179427 | 265 | 9.145833 | 24.23645745 | Human papillomavirus | 10566 | Viruses | Viruses | 479 | 9.38e-131 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g2161375 | i0 | 99.245 | 1.88679245283019 | 265 | 2 | 100 | 0 | 1 | 265 | 6357 | 6093 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 500 | 479 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 7923820 | 7923820 | PRJNA1120060_P_NODE_767_length_8024_cov_41.330273_g202_i0 | PRJNA1120060 | 767 | 8024 | 41.330273 | 3316.34110552 | Dyothetapapillomavirus 1 | 1235662 | Viruses | Viruses | 9058 | 0 | NTclustered | gi|1464308911|ref|NC_038520.1| | 568209 | g202 | i0 | 99.878 | 3.14930209371884 | 4923 | 6 | 100 | 0 | 1 | 4923 | 4923 | 1 | Feline papillomavirus type 2 isolate Main Coon 2007, complete genome | blastn | 25270 | 9058 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Dyothetapapillomavirus | Dyothetapapillomavirus 1 | ||
| 9193942 | 9193942 | PRJNA1120060_P_NODE_438128_length_379_cov_8.192810_g420631_i0 | PRJNA1120060 | 438128 | 379 | 8.19281 | 31.0507499 | Human papillomavirus | 10566 | Viruses | Viruses | 390 | 6.74e-104 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g420631 | i0 | 99.078 | 0.965699208443272 | 217 | 2 | 97 | 0 | 2 | 218 | 4630 | 4846 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 366 | 390 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 9197125 | 9197125 | PRJNA1120060_P_NODE_64768_length_654_cov_5.759036_g52152_i0 | PRJNA1120060 | 64768 | 654 | 5.759036 | 37.66409544 | Human papillomavirus | 10566 | Viruses | Viruses | 1181 | 0 | NTclustered | gi|1559669430|gb|MH777268.2| | 10566 | g52152 | i0 | 99.235 | 4.96483180428135 | 654 | 5 | 100 | 0 | 1 | 654 | 76 | 729 | MAG: Human papillomavirus isolate HPV-mSK_126, complete genome | blastn | 3247 | 1181 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 10449520 | 10449520 | PRJNA1120060_P_NODE_2024269_length_272_cov_1.020101_g2006236_i0 | PRJNA1120060 | 2024269 | 272 | 1.020101 | 2.77467472 | Grapevine geminivirus A defective DNA | 1928761 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|1898523535|gb|MT344724.1| | 1928761 | g2006236 | i0 | 100 | 0.220588235294118 | 30 | 0 | 11 | 0 | 165 | 194 | 1278 | 1307 | Grapevine geminivirus A defective DNA isolate def2019YM4, complete genome | blastn | 60 | 56.5 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Repensiviricetes | Geplafuvirales | Geminiviridae | Grapevine geminivirus A defective DNA | |||
| 13009653 | 13009653 | PRJNA1120060_P_NODE_2817271_length_245_cov_4.860465_g2799185_i0 | PRJNA1120060 | 2817271 | 245 | 4.860465 | 11.90813925 | Melanogrammus aeglefinus-associated papillomavirus 1 | 2683333 | Viruses | Viruses | 52.8 | 0.022 | NTclustered | gi|2069601150|gb|MH617143.2| | 2683333 | g2799185 | i0 | 96.774 | 0.126530612244898 | 31 | 1 | 13 | 0 | 144 | 174 | 3161 | 3191 | MAG: Melanogrammus aeglefinus-associated papillomavirus 1 isolate ctce22, complete genome | blastn | 31 | 52.8 | 1 | Viruses | non-mammal papillomaviruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Melanogrammus aeglefinus-associated papillomavirus 1 | ||
| 14260298 | 14260298 | PRJNA1120060_P_NODE_1005072_length_312_cov_2.497908_g987143_i0 | PRJNA1120060 | 1005072 | 312 | 2.497908 | 7.79347296 | Human papillomavirus | 10566 | Viruses | Viruses | 279 | 1.23e-70 | NTclustered | gi|1144331739|gb|KX781283.1| | 10566 | g987143 | i0 | 100 | 3.37820512820513 | 151 | 0 | 97 | 0 | 162 | 312 | 2906 | 2756 | Human papillomavirus isolate Dysk4, complete genome | blastn | 1054 | 279 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 16829885 | 16829885 | PRJNA1120060_P_NODE_2529174_length_253_cov_1.294444_g2511102_i0 | PRJNA1120060 | 2529174 | 253 | 1.294444 | 3.27494332 | Gammapapillomavirus 10 | 1175852 | Viruses | Viruses | 468 | 1.92e-127 | NTclustered | gi|312451813|gb|GU117633.1| | 909332 | g2511102 | i0 | 100 | 1.98418972332016 | 253 | 0 | 100 | 0 | 1 | 253 | 203 | 455 | Human papillomavirus type 133, complete genome | blastn | 502 | 468 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Gammapapillomavirus | Gammapapillomavirus 10 | ||
| 16849141 | 16849141 | PRJNA1120060_P_NODE_835214_length_316_cov_2.481481_g817301_i0 | PRJNA1120060 | 835214 | 316 | 2.481481 | 7.84147996 | TTV-like mini virus | 93678 | Viruses | Viruses | 54.7 | 0.008 | NTclustered | gi|2164985327|gb|MN770248.1| | 93678 | g817301 | i0 | 96.97 | 0.522151898734177 | 33 | 0 | 10 | 1 | 118 | 150 | 282 | 313 | MAG: TTV-like mini virus isolate SAfiA-300-21, complete genome | blastn | 165 | 54.7 | 1 | Viruses | Shotokuvirae | Commensaviricota | Cardeaviricetes | Sanitavirales | Anelloviridae | Betatorquevirus | TTV-like mini virus | ||
| 18110703 | 18110703 | PRJNA1120060_P_NODE_3068375_length_237_cov_4.548780_g3050274_i0 | PRJNA1120060 | 3068375 | 237 | 4.54878 | 10.7806086 | Betapapillomavirus 2 | 333924 | Viruses | Viruses | 394 | 3.069999999999999e-105 | NTclustered | gi|186461194|gb|EU410348.1| | 518629 | g3050274 | i0 | 96.624 | 9.19409282700422 | 237 | 8 | 100 | 0 | 1 | 237 | 5771 | 5535 | Human papillomavirus type 110, complete genome | blastn | 2179 | 394 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Betapapillomavirus | Betapapillomavirus 2 | ||
| 18115814 | 18115814 | PRJNA1120060_P_NODE_3529095_length_204_cov_5.916031_g3510968_i0 | PRJNA1120060 | 3529095 | 204 | 5.916031 | 12.06870324 | Gammapapillomavirus 7 | 1175849 | Viruses | Viruses | 324 | 3.42e-84 | NTclustered | gi|343411537|gb|HM999990.1| | 1070411 | g3510968 | i0 | 95.98 | 2.63235294117647 | 199 | 8 | 98 | 0 | 1 | 199 | 3675 | 3873 | Human papillomavirus type 138 isolate GH13, complete genome | blastn | 537 | 324 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Gammapapillomavirus | Gammapapillomavirus 7 | ||
| 23183659 | 23183659 | PRJNA1120060_P_NODE_1013599_length_312_cov_2.372385_g995670_i0 | PRJNA1120060 | 1013599 | 312 | 2.372385 | 7.4018412 | Galvornvirus isengard | 2955925 | Viruses | Viruses | 52.8 | 0.029 | NTclustered | gi|2302020959|gb|MT208456.1| | 1954248 | g995670 | i0 | 94.286 | 0.112179487179487 | 35 | 1 | 11 | 1 | 38 | 71 | 3520 | 3486 | MAG: Circoviridae sp. isolate CN13_L19_588, complete genome | blastn | 35 | 52.8 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Arfiviricetes | Rohanvirales | Nenyaviridae | Galvornvirus | Galvornvirus isengard | ||
| 23193533 | 23193533 | PRJNA1120060_P_NODE_1676379_length_286_cov_1.492958_g1658378_i0 | PRJNA1120060 | 1676379 | 286 | 1.492958 | 4.26985988 | Human papillomavirus | 10566 | Viruses | Viruses | 501 | 2.18e-137 | NTclustered | gi|1559669484|gb|MH777321.2| | 10566 | g1658378 | i0 | 98.252 | 14.8251748251748 | 286 | 5 | 100 | 0 | 1 | 286 | 4458 | 4743 | MAG: Human papillomavirus isolate HPV-mSK_179, complete genome | blastn | 4240 | 501 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 23196495 | 23196495 | PRJNA1120060_P_NODE_1886839_length_277_cov_2.500000_g1868820_i0 | PRJNA1120060 | 1886839 | 277 | 2.5 | 6.925 | Human papillomavirus | 10566 | Viruses | Viruses | 507 | 4.53e-139 | NTclustered | gi|371486189|gb|JF966371.1| | 10566 | g1868820 | i0 | 99.639 | 3 | 277 | 1 | 100 | 0 | 1 | 277 | 1386 | 1662 | Human papillomavirus isolate 915 F 06 002 KN1, complete genome | blastn | 831 | 507 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 23205309 | 23205309 | PRJNA1120060_P_NODE_2542159_length_252_cov_3.525140_g2524084_i0 | PRJNA1120060 | 2542159 | 252 | 3.52514 | 8.8833528 | Galvornvirus isengard | 2955925 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|2302017528|gb|MT205156.1| | 1954248 | g2524084 | i0 | 90.476 | 0.166666666666667 | 42 | 2 | 16 | 2 | 45 | 85 | 1856 | 1816 | MAG: Circoviridae sp. isolate CN3_L16_2910, complete genome | blastn | 42 | 54.7 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Arfiviricetes | Rohanvirales | Nenyaviridae | Galvornvirus | Galvornvirus isengard | ||
| 23220708 | 23220708 | PRJNA1120060_P_NODE_586599_length_351_cov_1.179856_g568888_i0 | PRJNA1120060 | 586599 | 351 | 1.179856 | 4.14129456 | Galvornvirus isengard | 2955925 | Viruses | Viruses | 52.8 | 0.033 | NTclustered | gi|2302008998|gb|MT202264.1| | 1954248 | g568888 | i0 | 100 | 0.0797720797720798 | 28 | 0 | 8 | 0 | 134 | 161 | 1191 | 1218 | MAG: Circoviridae sp. isolate CN3_L15_2942, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Shotokuvirae | Cressdnaviricota | Arfiviricetes | Rohanvirales | Nenyaviridae | Galvornvirus | Galvornvirus isengard |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;