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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 16 ✖

bioproject 1

  • PRJNA1118794 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
230646 230646 PRJNA1118794_P_NODE_37061_length_275_cov_1.381188_g36311_i0 PRJNA1118794 37061 275 1.381188 3.798267 Methanolapillus ohkumae 3028298 Archaea Archaea 54.7 0.007   NTclustered gi|2591778106|gb|CP131061.1| 3028298 g36311 i0 100 0.105454545454545 29 0 11 0 139 167 1605995 1605967 Methanolapillus ohkumae strain Am2 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolapillus Methanolapillus ohkumae
1024838 1024838 PRJNA1118794_P_NODE_21401_length_331_cov_1.127907_g20651_i0 PRJNA1118794 21401 331 1.127907 3.73337217 Thermoproteati 1783275 Archaea Archaea 606 5.299999999999998e-169   NTclustered gi|2258174|gb|U68650.1|UAU68650 13776 g20651 i0 99.698 100 331 1 100 0 1 331 13 343 Unidentified archaeon from the Amazon 16S ribosomal RNA gene, partial sequence blastn 33100 606 1 Archaea               unidentified archaeon
1024984 1024984 PRJNA1118794_P_NODE_66401_length_244_cov_0.900585_g65651_i0 PRJNA1118794 66401 244 0.900585 2.1974274 Methanocella 570266 Archaea Archaea 246 9.409999999999999e-61   NTclustered gi|282154984|dbj|AP011532.1| 304371 g65651 i0 84.898 14.8934426229508 245 35 100 2 1 244 110507 110264 Methanocella paludicola SANAE DNA, complete genome blastn 3634 246 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
2781196 2781196 PRJNA1118794_P_NODE_35183_length_279_cov_1.694175_g34433_i0 PRJNA1118794 35183 279 1.694175 4.72674825 uncultured archaeon 115547 Archaea Archaea 346 1.05e-90   NTclustered gi|388254672|gb|JQ768092.1| 115547 g34433 i0 89.209 44.2974910394265 278 28 99 2 1 277 29814 29538 Uncultured archaeon clone 02j05, complete sequence blastn 12359 346 1 Archaea               uncultured archaeon
2781519 2781519 PRJNA1118794_P_NODE_63823_length_245_cov_0.895349_g63073_i0 PRJNA1118794 63823 245 0.895349 2.19360505 Methanocorpusculum labreanum 83984 Archaea Archaea 209 1.24e-49   NTclustered gi|124362370|gb|CP000559.1| 410358 g63073 i0 95.42 2.62857142857143 131 6 53 0 115 245 82717 82587 Methanocorpusculum labreanum Z, complete genome blastn 644 209 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum
4057306 4057306 PRJNA1118794_P_NODE_23364_length_320_cov_4.821862_g22614_i0 PRJNA1118794 23364 320 4.821862 15.4299584 Methanochimaera problematica 2609417 Archaea Archaea 58.4 6.45e-4   NTclustered gi|2594454307|gb|CP043875.1| 2609417 g22614 i0 94.595 0.296875 37 2 12 0 257 293 1525667 1525703 Methanochimaera problematica strain FWC-SCC4 chromosome, complete genome blastn 95 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanochimaera Methanochimaera problematica
5333754 5333754 PRJNA1118794_P_NODE_41745_length_265_cov_1.385417_g40995_i0 PRJNA1118794 41745 265 1.385417 3.67135505 Nitrosotalea devaniterrae 1078905 Archaea Archaea 483 7.249999999999998e-132   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g40995 i0 99.623 100.849056603774 265 0 99 1 2 265 1345388 1345652 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 26725 483 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
8678212 8678212 PRJNA1118794_P_NODE_48147_length_251_cov_2.410112_g47397_i0 PRJNA1118794 48147 251 2.410112 6.04938112 Methanocella 570266 Archaea Archaea 316 7.31e-82   NTclustered gi|282154984|dbj|AP011532.1| 304371 g47397 i0 89.641 12.4143426294821 251 22 99 3 1 249 109433 109681 Methanocella paludicola SANAE DNA, complete genome blastn 3116 316 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
9158302 9158302 PRJNA1118794_P_NODE_26128_length_308_cov_2.489362_g25378_i0 PRJNA1118794 26128 308 2.489362 7.66723496 Nitrosotalea devaniterrae 1078905 Archaea Archaea 564 2.99e-156   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g25378 i0 99.675 89.6201298701299 308 1 100 0 1 308 1346527 1346220 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 27603 564 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
10433966 10433966 PRJNA1118794_P_NODE_24389_length_316_cov_1.008230_g23639_i0 PRJNA1118794 24389 316 1.00823 3.1860068 Nitrosotalea devaniterrae 1078905 Archaea Archaea 568 2.3799999999999994e-157   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g23639 i0 99.051 13.873417721519 316 3 100 0 1 316 1346560 1346875 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 4384 568 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
11709687 11709687 PRJNA1118794_P_NODE_61690_length_246_cov_0.890173_g60940_i0 PRJNA1118794 61690 246 0.890173 2.18982558 Natronobacterium lacisalsi 229731 Archaea Archaea 62.1 3.69e-5   NTclustered gi|1134496220|gb|CP019285.1| 358396 g60940 i0 86.667 0.414634146341463 60 3 23 3 41 96 1323563 1323621 Halobiforma lacisalsi AJ5, complete genome blastn 102 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobacterium Natronobacterium lacisalsi
15533300 15533300 PRJNA1118794_P_NODE_36953_length_275_cov_1.524752_g36203_i0 PRJNA1118794 36953 275 1.524752 4.193068 uncultured archaeon 115547 Archaea Archaea 492 1.26e-134   NTclustered gi|1574027464|gb|MK527565.1| 115547 g36203 i0 98.909 100.014545454545 275 3 100 0 1 275 73 347 Uncultured archaeon clone LRPA_21f_23 16S ribosomal RNA gene, partial sequence blastn 27504 492 1 Archaea               uncultured archaeon
18876607 18876607 PRJNA1118794_P_NODE_26715_length_306_cov_1.321888_g25965_i0 PRJNA1118794 26715 306 1.321888 4.04497728 Archaea 2157 Archaea Archaea 523 5.0299999999999986e-144   NTclustered gi|21952342|gb|AF523939.1| 115547 g25965 i0 97.386 84.1601307189542 306 8 100 0 1 306 1113 1418 Uncultured archaeon clone ARCP1-30 16S ribosomal RNA gene, partial sequence blastn 25753 523 1 Archaea               uncultured archaeon
20151510 20151510 PRJNA1118794_P_NODE_9356_length_461_cov_3.427835_g8608_i0 PRJNA1118794 9356 461 3.427835 15.80231935 Methanococcus 2184 Archaea Archaea 52.8 0.045   NTclustered gi|1377580313|gb|CP020120.1| 39152 g8608 i0 96.774 0.262472885032538 31 1 7 0 400 430 476940 476910 Methanococcus maripaludis strain OS7mut1, complete genome blastn 121 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
22701801 22701801 PRJNA1118794_P_NODE_13918_length_387_cov_4.745223_g13168_i0 PRJNA1118794 13918 387 4.745223 18.36401301 Methanococcus 2184 Archaea Archaea 52.8 0.037   NTclustered gi|1377580313|gb|CP020120.1| 39152 g13168 i0 96.774 0.31266149870801 31 1 8 0 332 362 476910 476940 Methanococcus maripaludis strain OS7mut1, complete genome blastn 121 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
25251181 25251181 PRJNA1118794_P_NODE_14160_length_385_cov_0.855769_g13410_i0 PRJNA1118794 14160 385 0.855769 3.29471065 Methanocella 570266 Archaea Archaea 562 1.37e-155   NTclustered gi|282154984|dbj|AP011532.1| 304371 g13410 i0 93.194 219.651948051948 382 26 99 0 1 382 109854 110235 Methanocella paludicola SANAE DNA, complete genome blastn 84566 562 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;