RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1118794 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7884095 7884095 PRJNA1118794_P_NODE_8547_length_481_cov_5.671569_g7803_i0 PRJNA1118794 8547 481 5.671569 27.28024689 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 802 0   NTclustered gi|2874254138|emb|OY970223.1| 3107663 g7803 i0 96.881 635.126819126819 481 12 99 3 2 481 2315690 2315212 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.c.5 genome assembly, chromosome: 1 blastn 305496 802 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14259593 14259593 PRJNA1118794_P_NODE_31372_length_288_cov_3.539535_g30622_i0 PRJNA1118794 31372 288 3.539535 10.1938608 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 468 2.23e-127   NTclustered gi|2874253986|emb|OY970311.1| 3107663 g30622 i0 96.154 173.711805555556 286 11 99 0 1 286 2945518 2945233 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.13 genome assembly, chromosome: 1 blastn 50029 468 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
16807574 16807574 PRJNA1118794_P_NODE_21434_length_331_cov_0.864341_g20684_i0 PRJNA1118794 21434 331 0.864341 2.86096871 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 588 1.92e-163   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g20684 i0 98.788 6.1631419939577 330 4 99 0 1 330 5032597 5032926 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 2040 588 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
19356551 19356551 PRJNA1118794_P_NODE_35456_length_279_cov_1.121359_g34706_i0 PRJNA1118794 35456 279 1.121359 3.12859161 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 444 3.63e-120   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g34706 i0 95.341 867.94982078853 279 13 100 0 1 279 2165814 2165536 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 242158 444 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;