contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230429 | 230429 | PRJNA1118794_P_NODE_19921_length_339_cov_1.496241_g19171_i0 | PRJNA1118794 | 19921 | 339 | 1.496241 | 5.07225699 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 455 | 2.0900000000000003e-123 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g19171 | i0 | 90.936 | 191.964601769911 | 342 | 26 | 100 | 5 | 1 | 339 | 3258 | 3597 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 65076 | 455 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 4057204 | 4057204 | PRJNA1118794_P_NODE_16084_length_366_cov_2.614334_g15334_i0 | PRJNA1118794 | 16084 | 366 | 2.614334 | 9.56846244 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 496 | 1.34e-135 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g15334 | i0 | 91.257 | 224.967213114754 | 366 | 28 | 100 | 3 | 1 | 366 | 3124 | 3485 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 82338 | 496 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 6608530 | 6608530 | PRJNA1118794_P_NODE_22306_length_326_cov_1.217391_g21556_i0 | PRJNA1118794 | 22306 | 326 | 1.217391 | 3.96869466 | Brachyspira intermedia | 84377 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|343385146|gb|CP002874.1| | 1045858 | g21556 | i0 | 100 | 0.0889570552147239 | 29 | 0 | 9 | 0 | 77 | 105 | 1081224 | 1081196 | Brachyspira intermedia PWS/A, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira intermedia | ||
| 9158126 | 9158126 | PRJNA1118794_P_NODE_12668_length_403_cov_2.012121_g11918_i0 | PRJNA1118794 | 12668 | 403 | 2.012121 | 8.10884763 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 124 | 8.07e-24 | NTclustered | gi|2621785465|emb|OY781923.1| | 2791017 | g11918 | i0 | 91.304 | 82.7841191066997 | 92 | 6 | 23 | 2 | 223 | 313 | 114021 | 114111 | MAG: Sphaerochaetaceae bacterium isolate 77f26d43-b2b0-4d0d-8c29-067165085957 genome assembly, chromosome: 1 | blastn | 33362 | 124 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 9158396 | 9158396 | PRJNA1118794_P_NODE_33188_length_284_cov_1.426540_g32438_i0 | PRJNA1118794 | 33188 | 284 | 1.42654 | 4.0513736 | Brachyspira pilosicoli | 52584 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|404429427|emb|HE793032.1| | 1161918 | g32438 | i0 | 100 | 0.102112676056338 | 29 | 0 | 10 | 0 | 185 | 213 | 1162397 | 1162369 | Brachyspira pilosicoli WesB complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira pilosicoli | ||
| 14259580 | 14259580 | PRJNA1118794_P_NODE_30252_length_291_cov_2.825688_g29502_i0 | PRJNA1118794 | 30252 | 291 | 2.825688 | 8.22275208 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 488 | 1.7299999999999995e-133 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g29502 | i0 | 96.907 | 155.824742268041 | 291 | 9 | 100 | 0 | 1 | 291 | 4875 | 4585 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 45345 | 488 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 15052624 | 15052624 | PRJNA1118794_P_NODE_50432_length_250_cov_1.903955_g49682_i0 | PRJNA1118794 | 50432 | 250 | 1.903955 | 4.7598875 | Treponema | 157 | Bacteria | Bacteria | 440 | 4.1399999999999976e-119 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g49682 | i0 | 98.4 | 185.584 | 250 | 4 | 100 | 0 | 1 | 250 | 2079204 | 2078955 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 46396 | 440 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 18876553 | 18876553 | PRJNA1118794_P_NODE_13835_length_388_cov_2.260317_g13085_i0 | PRJNA1118794 | 13835 | 388 | 2.260317 | 8.77002996 | Turneriella | 338321 | Bacteria | Bacteria | 634 | 2.8899999999999995e-177 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g13085 | i0 | 96.134 | 675.113402061856 | 388 | 15 | 100 | 0 | 1 | 388 | 1533 | 1920 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 261944 | 634 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 21426856 | 21426856 | PRJNA1118794_P_NODE_10477_length_437_cov_1.250000_g9729_i0 | PRJNA1118794 | 10477 | 437 | 1.25 | 5.4625 | Turneriella | 338321 | Bacteria | Bacteria | 763 | 0 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g9729 | i0 | 98.169 | 172.903890160183 | 437 | 8 | 100 | 0 | 1 | 437 | 642 | 206 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 75559 | 763 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 21907567 | 21907567 | PRJNA1118794_P_NODE_35558_length_278_cov_2.634146_g34808_i0 | PRJNA1118794 | 35558 | 278 | 2.634146 | 7.32292588 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 387 | 6.179999999999998e-103 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g34808 | i0 | 91.844 | 445.352517985611 | 282 | 15 | 99 | 8 | 1 | 277 | 2590 | 2312 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 123808 | 387 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;