RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2780952 2780952 PRJNA1118794_P_NODE_16483_length_363_cov_1.327586_g15733_i0 PRJNA1118794 16483 363 1.327586 4.81913718 Halichondria panicea 6063 Porifera other_Eukaryota 56.5 0.003   NTclustered gi|2719012635|ref|XM_064540031.1| 6063 g15733 i0 97.059 0.09366391184573 34 0 9 1 213 246 3385 3417 PREDICTED: Halichondria panicea uncharacterized LOC135343080 (LOC135343080), mRNA blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
20631619 20631619 PRJNA1118794_P_NODE_25217_length_312_cov_1.627615_g24467_i0 PRJNA1118794 25217 312 1.627615 5.0781588 Aiolochroia crassa 261677 Porifera other_Eukaryota 76.8 1.73e-9   NTclustered gi|2802839310|emb|OZ181693.1| 261677 g24467 i0 92.593 14.1282051282051 54 3 17 1 227 280 407 459 Aiolochroia crassa genome assembly, organelle: mitochondrion blastn 4408 76.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Verongiida Aplysinidae Aiolochroia Aiolochroia crassa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;