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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
230739 230739 PRJNA1118794_P_NODE_43921_length_260_cov_1.647059_g43171_i0 PRJNA1118794 43921 260 1.647059 4.2823534 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|686670560|emb|LK405726.1| 57078 g43171 i0 100 0.107692307692308 28 0 11 0 212 239 1745 1772 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0012303 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
1505871 1505871 PRJNA1118794_P_NODE_75022_length_235_cov_3.709877_g74272_i0 PRJNA1118794 75022 235 3.709877 8.71821095 Hysteromorpha triloba 234889 Platyhelminthes Platyhelminthes 87.9 5.77e-13   NTclustered gi|1511118671|gb|MG770070.1| 234889 g74272 i0 84.884 0.365957446808511 86 13 37 0 142 227 508 423 Hysteromorpha triloba voucher 3LF-2754 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 86 87.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Diplostomida Diplostomidae Hysteromorpha Hysteromorpha triloba
10433975 10433975 PRJNA1118794_P_NODE_24969_length_313_cov_1.708333_g24219_i0 PRJNA1118794 24969 313 1.708333 5.34708229 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 102 2.87e-17   NTclustered gi|148356702|dbj|AB243058.1| 6161 g24219 i0 82.203 1.00958466453674 118 21 38 0 194 311 424 307 Dugesia japonica Djmu1 mRNA for adaptor-related protein complex 1 mu 1 subunit, complete cds blastn 316 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
16807520 16807520 PRJNA1118794_P_NODE_17594_length_354_cov_2.569395_g16844_i0 PRJNA1118794 17594 354 2.569395 9.0956583 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 604 2.0499999999999992e-168   NTclustered gi|68479954|gb|DQ076149.1| 6182 g16844 i0 97.458 1 354 9 100 0 1 354 365 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 354 604 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19356818 19356818 PRJNA1118794_P_NODE_57476_length_247_cov_1.770115_g56726_i0 PRJNA1118794 57476 247 1.770115 4.37218405 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 224 4.469999999999999e-54   NTclustered gi|1084302960|ref|XM_018789082.1| 6183 g56726 i0 88.235 73.1133603238866 187 22 76 0 53 239 1342 1156 Schistosoma mansoni putative tubulin beta chain partial mRNA blastn 18059 224 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
20151456 20151456 PRJNA1118794_P_NODE_59196_length_247_cov_0.885057_g58446_i0 PRJNA1118794 59196 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.006   NTclustered gi|690652271|emb|LN200425.1| 99802 g58446 i0 100 3.30364372469636 29 0 12 0 1 29 698 726 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0029760 blastn 816 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;