RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1118794 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4057760 4057760 PRJNA1118794_P_NODE_61204_length_246_cov_0.890173_g60454_i0 PRJNA1118794 61204 246 0.890173 2.18982558 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 291 4.33e-74   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g60454 i0 88.211 9.56910569105691 246 25 99 4 3 246 76314 76557 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 2354 291 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
23183231 23183231 PRJNA1118794_P_NODE_65959_length_244_cov_0.900585_g65209_i0 PRJNA1118794 65959 244 0.900585 2.1974274 Candidatus Minusculum obligatum 1948790 Bacteria Bacteria 228 3.409999999999999e-55   NTclustered gi|2862534883|gb|CP174360.1| 1948790 g65209 i0 86.538 204.364754098361 208 27 85 1 38 244 189767 189560 MAG: Patescibacteria group bacterium UBA2103 chromosome, complete genome blastn 49865 228 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Minusculum Candidatus Minusculum obligatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;