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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA1118794 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2781347 2781347 PRJNA1118794_P_NODE_4563_length_663_cov_26.940678_g3843_i0 PRJNA1118794 4563 663 26.940678 178.61669514 Ripella sp. 805 1217113 Discosea other_Eukaryota 854 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3843 i0 95.229 82.4811463046757 545 17 82 9 1 541 540 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54685 854 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5333786 5333786 PRJNA1118794_P_NODE_43905_length_260_cov_1.647059_g43155_i0 PRJNA1118794 43905 260 1.647059 4.2823534 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 91.6 5.02e-14   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g43155 i0 93.443 5.93076923076923 61 4 23 0 198 258 231 171 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 1542 91.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5334178 5334178 PRJNA1118794_P_NODE_8605_length_480_cov_1.186732_g7861_i0 PRJNA1118794 8605 480 1.186732 5.6963136 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 593 6.189999999999998e-165   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g7861 i0 89.3 33.5166666666667 486 35 99 11 1 479 1460 1935 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 16088 593 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
6609018 6609018 PRJNA1118794_P_NODE_6346_length_558_cov_2.519588_g5607_i0 PRJNA1118794 6346 558 2.519588 14.05930104 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 737 0   NTclustered gi|354720326|gb|HQ687485.1| 1105345 g5607 i0 90.78 37.8458781362007 564 35 99 12 3 558 566 12 Vexillifera bacillipedes strain CCAP 1590/1 small subunit ribosomal RNA gene, partial sequence blastn 21118 737 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
9158910 9158910 PRJNA1118794_P_NODE_7728_length_505_cov_22.074074_g6985_i0 PRJNA1118794 7728 505 22.074074 111.4740737 Ripella sp. GP2 1217115 Discosea other_Eukaryota 804 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g6985 i0 95.464 100.958415841584 507 18 100 5 1 505 1072 569 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 50984 804 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
10434276 10434276 PRJNA1118794_P_NODE_47289_length_253_cov_1.711111_g46539_i0 PRJNA1118794 47289 253 1.711111 4.32911083 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 158 4.729999999999999e-34   NTclustered gi|470384206|ref|XM_004333979.1| 1257118 g46539 i0 79.149 1.98418972332016 235 44 92 5 4 235 708 476 Acanthamoeba castellanii str. Neff alphaactinin, putative (ACA1_321210), partial mRNA blastn 502 158 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10434627 10434627 PRJNA1118794_P_NODE_8349_length_487_cov_2.743961_g7606_i0 PRJNA1118794 8349 487 2.743961 13.36309007 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 556 8.25e-154   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g7606 i0 89.865 42.9425051334702 444 29 90 13 43 481 793 1225 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 20913 556 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
14259681 14259681 PRJNA1118794_P_NODE_37612_length_274_cov_1.293532_g36862_i0 PRJNA1118794 37612 274 1.293532 3.54427768 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 8.68e-32   NTclustered gi|470517203|ref|XM_004353125.1| 1257118 g36862 i0 81.026 20.3175182481752 195 31 70 5 36 227 1213 1404 Acanthamoeba castellanii str. Neff alanineglyoxylate aminotransferase (ACA1_072820), partial mRNA blastn 5567 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14259866 14259866 PRJNA1118794_P_NODE_5392_length_608_cov_1.801869_g4661_i0 PRJNA1118794 5392 608 1.801869 10.95536352 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 577 8.04e-160   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4661 i0 84.08 98.0493421052632 603 90 99 5 3 602 1171 1770 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 59614 577 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19356976 19356976 PRJNA1118794_P_NODE_72036_length_241_cov_2.863095_g71286_i0 PRJNA1118794 72036 241 2.863095 6.90005895 Vexillifera westveldii 1678067 Discosea other_Eukaryota 429 8.58e-116   NTclustered gi|861553791|gb|KP719187.1| 1678067 g71286 i0 98.76 86.6887966804979 242 2 100 1 1 241 974 733 Vexillifera westveldii strain A18WVB clone 10 small subunit ribosomal RNA gene, partial sequence blastn 20892 429 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera westveldii
20631972 20631972 PRJNA1118794_P_NODE_5457_length_604_cov_2.359699_g4726_i0 PRJNA1118794 5457 604 2.359699 14.25258196 Platyamoeba placida 3454475 Discosea other_Eukaryota 778 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g4726 i0 89.901 99.521523178808 604 61 100 0 1 604 1126 523 Platyamoeba placida actin mRNA, partial cds blastn 60111 778 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
21907660 21907660 PRJNA1118794_P_NODE_4178_length_697_cov_4.173077_g3467_i0 PRJNA1118794 4178 697 4.173077 29.08634669 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 379 2.81e-100   NTclustered gi|470380222|ref|XM_004333620.1| 1257118 g3467 i0 81.466 60.2109038737446 464 84 66 2 59 521 12 474 Acanthamoeba castellanii str. Neff ran, putative (ACA1_260190), partial mRNA blastn 41967 379 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24457339 24457339 PRJNA1118794_P_NODE_7480_length_513_cov_18.218182_g6739_i0 PRJNA1118794 7480 513 18.218182 93.45927366 Ripella platypodia 2047821 Discosea other_Eukaryota 798 0   NTclustered gi|1269228373|gb|MF683498.1| 2047821 g6739 i0 94.798 101.251461988304 519 15 100 9 1 513 1139 1651 Ripella platypodia clone 26.9.30 18S ribosomal RNA gene, partial sequence blastn 51942 798 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
24457386 24457386 PRJNA1118794_P_NODE_9160_length_466_cov_1.625954_g8412_i0 PRJNA1118794 9160 466 1.625954 7.57694564 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 5.419999999999999e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8412 i0 80.464 64.4399141630901 302 59 65 0 103 404 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;