RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2781071 2781071 PRJNA1118794_P_NODE_25723_length_310_cov_1.763713_g24973_i0 PRJNA1118794 25723 310 1.763713 5.4675103 uncultured Cryptomycota 1130064 Fungi Fungi 340 5.519999999999999e-89   NTclustered gi|2086101798|gb|MZ923359.1| 1130064 g24973 i0 91.27 81.5129032258065 252 18 81 4 58 309 906 1153 Uncultured Cryptomycota clone UMPB-65 small subunit ribosomal RNA gene, partial sequence blastn 25269 340 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota
15533292 15533292 PRJNA1118794_P_NODE_36393_length_276_cov_2.142857_g35643_i0 PRJNA1118794 36393 276 2.142857 5.91428532 Rozella sp. 1932610 Fungi Fungi 298 2.95e-76   NTclustered gi|2468791009|gb|OQ702919.1| 1932610 g35643 i0 86.282 100.815217391304 277 34 99 4 1 275 3596 3870 Rozella sp. isolate PSC238 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27825 298 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
20631416 20631416 PRJNA1118794_P_NODE_12257_length_409_cov_2.041667_g11507_i0 PRJNA1118794 12257 409 2.041667 8.35041803 Rozella sp. 1932610 Fungi Fungi 226 2.19e-54   NTclustered gi|2468791040|gb|OQ702927.1| 1932610 g11507 i0 78.202 100.332518337408 367 70 89 9 1 362 4118 4479 Rozella sp. isolate PSC259 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 41036 226 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
21426884 21426884 PRJNA1118794_P_NODE_16957_length_359_cov_1.548951_g16207_i0 PRJNA1118794 16957 359 1.548951 5.56073409 Opisthokonta 33154 Fungi Fungi 132 4.25e-26   NTclustered gi|311235546|ref|NG_027561.1| 281847 g16207 i0 81.212 47.0640668523677 165 29 46 2 4 167 1387 1224 Rozella allomycis UCBMG BK 47-054 28S rRNA gene, partial sequence; from reference material blastn 16896 132 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
24456665 24456665 PRJNA1118794_P_NODE_20400_length_336_cov_1.528517_g19650_i0 PRJNA1118794 20400 336 1.528517 5.13581712 uncultured Cryptomycota 1130064 Fungi Fungi 459 1.6e-124   NTclustered gi|2086101859|gb|MZ923420.1| 1130064 g19650 i0 91.369 70.5714285714286 336 27 100 2 1 336 481 148 Uncultured Cryptomycota clone UMPB-674 small subunit ribosomal RNA gene, partial sequence blastn 23712 459 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;