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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
230875 230875 PRJNA1118794_P_NODE_53601_length_249_cov_0.875000_g52851_i0 PRJNA1118794 53601 249 0.875 2.17875 Mantoniella tinhauana 3097027 Plants Plants 215 2.72e-51   NTclustered gi|2735153280|gb|CP140065.1| 3097027 g52851 i0 83.333 62.7630522088353 234 37 94 2 17 249 408673 408905 Mantoniella tinhauana isolate LFS chromosome 4 blastn 15628 215 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
1505717 1505717 PRJNA1118794_P_NODE_60742_length_246_cov_0.890173_g59992_i0 PRJNA1118794 60742 246 0.890173 2.18982558 Kirchneriella aperta 117505 Plants Plants 52.8 0.022   NTclustered gi|1008861801|ref|NC_029676.1| 117505 g59992 i0 100 0.113821138211382 28 0 11 0 205 232 21802 21775 Kirchneriella aperta strain SAG 2004 chloroplast, complete genome blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Kirchneriella Kirchneriella aperta
2781323 2781323 PRJNA1118794_P_NODE_43343_length_261_cov_2.861702_g42593_i0 PRJNA1118794 43343 261 2.861702 7.46904222 Balticola zimbabwiensis 51690 Plants Plants 117 8.32e-22   NTclustered gi|6120015|gb|AF183475.1| 51690 g42593 i0 91.765 31.4406130268199 85 3 32 4 179 261 1903 1821 Balticola zimbabwiensis strain UTEX LB 1758 28S ribosomal RNA gene, partial sequence blastn 8206 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Balticola Balticola zimbabwiensis
2781341 2781341 PRJNA1118794_P_NODE_44903_length_258_cov_1.610811_g44153_i0 PRJNA1118794 44903 258 1.610811 4.15589238 Volvox carteri 3067 Plants Plants 137 6.300000000000001e-28   NTclustered gi|302843775|ref|XM_002953383.1| 3068 g44153 i0 83.562 20.562015503876 146 24 57 0 82 227 65 210 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_105955), partial mRNA blastn 5305 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
5333512 5333512 PRJNA1118794_P_NODE_23445_length_320_cov_1.518219_g22695_i0 PRJNA1118794 23445 320 1.518219 4.8583008 Gloeomonas rubrifilum 158506 Plants Plants 56.5 0.002   NTclustered gi|1375380782|dbj|LC360481.1| 158506 g22695 i0 100 0.18125 30 0 9 0 109 138 1458 1487 Gloeomonas rubrifilum SAG 3.85 gene for 26S ribosomal RNA, partial sequence blastn 58 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Gloeomonas Gloeomonas rubrifilum
6608653 6608653 PRJNA1118794_P_NODE_31966_length_287_cov_1.383178_g31216_i0 PRJNA1118794 31966 287 1.383178 3.96972086 Auxenochlorella protothecoides 3075 Plants Plants 54.7 0.007   NTclustered gi|760442864|ref|XM_011400199.1| 3075 g31216 i0 83.929 0.195121951219512 56 9 20 0 212 267 1184 1129 Auxenochlorella protothecoides Heat shock protein 90-2 partial mRNA blastn 56 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
6608802 6608802 PRJNA1118794_P_NODE_43846_length_260_cov_2.139037_g43096_i0 PRJNA1118794 43846 260 2.139037 5.5614962 Phyllosiphon coccidium 1837062 Plants Plants 324 4.55e-84   NTclustered gi|2473928268|ref|NC_072900.1| 1837062 g43096 i0 89.189 89.6115384615385 259 28 99 0 2 260 123251 122993 Phyllosiphon coccidium clone S213 chloroplast, complete genome blastn 23299 324 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Phyllosiphon Phyllosiphon coccidium
6609058 6609058 PRJNA1118794_P_NODE_67086_length_243_cov_1.800000_g66336_i0 PRJNA1118794 67086 243 1.8 4.374 Coccomyxa subellipsoidea 248742 Plants Plants 139 1.63e-28   NTclustered gi|545355296|ref|XM_005643393.1| 574566 g66336 i0 80.435 82.4609053497942 184 34 75 2 61 243 1732 1550 Coccomyxa subellipsoidea C-169 heat shock protein 70 mRNA blastn 20038 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
7402803 7402803 PRJNA1118794_P_NODE_36346_length_276_cov_3.931034_g35596_i0 PRJNA1118794 36346 276 3.931034 10.84965384 Opisthokonta 33154 Plants Plants 99 3.21e-16   NTclustered gi|612395756|ref|XM_007513336.1| 41875 g35596 i0 80.303 1.98913043478261 132 24 47 2 48 178 41 171 Bathycoccus prasinos 40S ribosomal protein S29 (Bathy04g01450), partial mRNA blastn 549 100 0.99 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
9158540 9158540 PRJNA1118794_P_NODE_4408_length_676_cov_4.645108_g3690_i0 PRJNA1118794 4408 676 4.645108 31.40093008 Chlamydomonas incerta 51695 Plants Plants 396 2.7e-105   NTclustered gi|74272606|gb|DQ122868.1| 51695 g3690 i0 79.89 6.30621301775148 547 104 80 6 96 639 572 29 Chlamydomonas incerta 40S ribosomal protein S3 mRNA, complete cds blastn 4263 396 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
9953270 9953270 PRJNA1118794_P_NODE_9148_length_466_cov_3.356234_g8400_i0 PRJNA1118794 9148 466 3.356234 15.64005044 Eukaryota 2759 Plants Plants 233 1.5099999999999998e-56   NTclustered gi|2082260161|ref|XM_001690941.2| 3055 g8400 i0 78.689 42.0944206008584 366 67 78 10 89 450 190 548 Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA blastn 19616 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10434465 10434465 PRJNA1118794_P_NODE_63669_length_245_cov_0.895349_g62919_i0 PRJNA1118794 63669 245 0.895349 2.19360505 Capsosiphon fulvescens 205396 Plants Plants 298 2.57e-76   NTclustered gi|1514830526|gb|MH790907.1| 205396 g62919 i0 89.121 103.416326530612 239 26 98 0 2 240 3746 3984 Capsosiphon fulvescens clone 5+6_typeB chloroplast sequence blastn 25337 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Ulotrichaceae Capsosiphon Capsosiphon fulvescens
14259433 14259433 PRJNA1118794_P_NODE_19632_length_341_cov_1.130597_g18882_i0 PRJNA1118794 19632 341 1.130597 3.85533577 Polulichloris maxima 2704661 Plants Plants 479 1.25e-130   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g18882 i0 92.082 149.445747800587 341 25 99 2 1 339 126269 125929 Polulichloris maxima clone L123 chloroplast, complete genome blastn 50961 479 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
14259887 14259887 PRJNA1118794_P_NODE_55852_length_248_cov_0.880000_g55102_i0 PRJNA1118794 55852 248 0.88 2.1824 Coccomyxa subellipsoidea 248742 Plants Plants 62.1 3.73e-5   NTclustered gi|545365919|ref|XM_005647835.1| 574566 g55102 i0 95 2.41129032258065 40 1 16 1 56 94 447 408 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 598 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
15533166 15533166 PRJNA1118794_P_NODE_27193_length_304_cov_1.129870_g26443_i0 PRJNA1118794 27193 304 1.12987 3.4348048 Auxenochlorella protothecoides 3075 Plants Plants 180 1.25e-40   NTclustered gi|760437194|ref|XM_011397364.1| 3075 g26443 i0 83 7.45394736842105 200 32 65 2 49 247 439 241 Auxenochlorella protothecoides 40S ribosomal protein S3a partial mRNA blastn 2266 180 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
18876564 18876564 PRJNA1118794_P_NODE_16515_length_363_cov_1.058621_g15765_i0 PRJNA1118794 16515 363 1.058621 3.84279423 Eukaryota 2759 Plants Plants 161 5.479999999999998e-35   NTclustered gi|2082249559|ref|XM_043063790.1| 3055 g15765 i0 81.683 38.2176308539945 202 29 55 8 116 313 155 352 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g310700v5), mRNA blastn 13873 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20631760 20631760 PRJNA1118794_P_NODE_35637_length_278_cov_1.639024_g34887_i0 PRJNA1118794 35637 278 1.639024 4.55648672 Micromonas commoda 296587 Plants Plants 108 5.38e-19   NTclustered gi|255072416|ref|XM_002499837.1| 296587 g34887 i0 91.139 14.8345323741007 79 7 28 0 10 88 327 249 Micromonas commoda predicted protein mRNA blastn 4124 108 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
21907339 21907339 PRJNA1118794_P_NODE_18338_length_349_cov_1.673913_g17588_i0 PRJNA1118794 18338 349 1.673913 5.84195637 Chlamydomonas reinhardtii 3055 Plants Plants 263 1.4e-65   NTclustered gi|2082238339|ref|XM_001701832.2| 3055 g17588 i0 81.703 76.4928366762178 317 56 91 2 1 316 1203 888 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g080600v5), mRNA blastn 26696 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22701816 22701816 PRJNA1118794_P_NODE_16738_length_361_cov_1.055556_g15988_i0 PRJNA1118794 16738 361 1.055556 3.81055716 Ulva 3118 Plants Plants 52.8 0.034   NTclustered gi|2895119976|gb|PV023352.1| 83797 g15988 i0 100 0.310249307479224 28 0 8 0 324 351 66290 66317 Ulva taeniata mitochondrion, complete genome blastn 112 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva taeniata
24457287 24457287 PRJNA1118794_P_NODE_71380_length_242_cov_0.911243_g70630_i0 PRJNA1118794 71380 242 0.911243 2.20520806 Chlamydomonas reinhardtii 3055 Plants Plants 278 3.3e-70   NTclustered gi|2082235498|ref|XM_001700320.2| 3055 g70630 i0 87.764 76.0619834710744 237 29 98 0 1 237 51 287 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA blastn 18407 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;