contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230559 | 230559 | PRJNA1118794_P_NODE_29481_length_294_cov_2.371041_g28731_i0 | PRJNA1118794 | 29481 | 294 | 2.371041 | 6.97086054 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 254 | 6.97e-63 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g28731 | i0 | 83.513 | 253.632653061224 | 279 | 39 | 94 | 6 | 19 | 294 | 3250358 | 3250084 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 74568 | 254 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 230982 | 230982 | PRJNA1118794_P_NODE_64261_length_245_cov_0.895349_g63511_i0 | PRJNA1118794 | 64261 | 245 | 0.895349 | 2.19360505 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 292 | 1.2e-74 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g63511 | i0 | 90.868 | 85.7673469387755 | 219 | 19 | 89 | 1 | 27 | 245 | 611500 | 611717 | Bdellovibrio bacteriovorus W, complete genome | blastn | 21013 | 292 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 2781376 | 2781376 | PRJNA1118794_P_NODE_48803_length_251_cov_0.865169_g48053_i0 | PRJNA1118794 | 48803 | 251 | 0.865169 | 2.17157419 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 270 | 5.77e-68 | NTclustered | gi|2800927921|gb|CP168969.1| | 959 | g48053 | i0 | 86.111 | 20.7729083665339 | 252 | 33 | 100 | 2 | 1 | 251 | 3806089 | 3805839 | Bdellovibrio bacteriovorus strain Bd10 chromosome, complete genome | blastn | 5214 | 270 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 8678126 | 8678126 | PRJNA1118794_P_NODE_23367_length_320_cov_3.627530_g22617_i0 | PRJNA1118794 | 23367 | 320 | 3.62753 | 11.608096 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 412 | 1.1999999999999999e-110 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g22617 | i0 | 91.892 | 191.53125 | 296 | 22 | 92 | 2 | 26 | 320 | 309 | 15 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 61290 | 412 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 8678248 | 8678248 | PRJNA1118794_P_NODE_6527_length_549_cov_1.886555_g5788_i0 | PRJNA1118794 | 6527 | 549 | 1.886555 | 10.35718695 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 335 | 4.789999999999999e-87 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g5788 | i0 | 79.406 | 146.342440801457 | 505 | 81 | 90 | 18 | 23 | 516 | 3250517 | 3251009 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 80342 | 335 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 8678251 | 8678251 | PRJNA1118794_P_NODE_66987_length_243_cov_2.100000_g66237_i0 | PRJNA1118794 | 66987 | 243 | 2.1 | 5.103 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 350 | 6.94e-92 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g66237 | i0 | 92.593 | 78.6707818930041 | 243 | 18 | 100 | 0 | 1 | 243 | 1467 | 1225 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 19117 | 350 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 15052529 | 15052529 | PRJNA1118794_P_NODE_14592_length_380_cov_1.915309_g13842_i0 | PRJNA1118794 | 14592 | 380 | 1.915309 | 7.2781742 | Bdellovibrio | 958 | Bacteria | Bacteria | 315 | 4.18e-81 | NTclustered | gi|2663425168|dbj|AP029173.1| | 3113893 | g13842 | i0 | 82.238 | 256.094736842105 | 411 | 30 | 97 | 16 | 1 | 369 | 756528 | 756119 | Bdellovibrio sp. CKG001 DNA, complete genome | blastn | 97316 | 315 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CKG001 | ||
| 18082342 | 18082342 | PRJNA1118794_P_NODE_37475_length_274_cov_1.527363_g36725_i0 | PRJNA1118794 | 37475 | 274 | 1.527363 | 4.18497462 | Silvanigrella aquatica | 1915309 | Bacteria | Bacteria | 106 | 1.9e-18 | NTclustered | gi|1114626566|gb|CP017834.1| | 1915309 | g36725 | i0 | 76.132 | 6.47445255474453 | 243 | 35 | 85 | 20 | 30 | 263 | 390360 | 390132 | Silvanigrella aquatica strain MWH-Nonnen-W8red chromosome | blastn | 1774 | 106 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrella | Silvanigrella aquatica | ||
| 21426941 | 21426941 | PRJNA1118794_P_NODE_34677_length_280_cov_4.623188_g33927_i0 | PRJNA1118794 | 34677 | 280 | 4.623188 | 12.9449264 | Bdellovibrio | 958 | Bacteria | Bacteria | 318 | 2.3e-82 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g33927 | i0 | 87.143 | 344.264285714286 | 280 | 36 | 100 | 0 | 1 | 280 | 785732 | 786011 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 96394 | 318 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 21907900 | 21907900 | PRJNA1118794_P_NODE_61018_length_246_cov_0.890173_g60268_i0 | PRJNA1118794 | 61018 | 246 | 0.890173 | 2.18982558 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 383 | 6.94e-102 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g60268 | i0 | 94.715 | 1 | 246 | 13 | 100 | 0 | 1 | 246 | 69428 | 69673 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 246 | 383 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 22701928 | 22701928 | PRJNA1118794_P_NODE_48398_length_251_cov_1.584270_g47648_i0 | PRJNA1118794 | 48398 | 251 | 1.58427 | 3.9765177 | Bdellovibrio | 958 | Bacteria | Bacteria | 381 | 2.549999999999999e-101 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g47648 | i0 | 94.024 | 42.7211155378486 | 251 | 15 | 100 | 0 | 1 | 251 | 3641473 | 3641723 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 10723 | 381 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23183268 | 23183268 | PRJNA1118794_P_NODE_69439_length_243_cov_0.858824_g68689_i0 | PRJNA1118794 | 69439 | 243 | 0.858824 | 2.08694232 | Pigmentibacter ruber | 2683196 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2651759839|dbj|AP029159.1| | 2683196 | g68689 | i0 | 100 | 0.11522633744856 | 28 | 0 | 12 | 0 | 87 | 114 | 1911853 | 1911880 | Pigmentibacter ruber GTC16762 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Pigmentibacter | Pigmentibacter ruber | ||
| 23977321 | 23977321 | PRJNA1118794_P_NODE_53519_length_249_cov_0.875000_g52769_i0 | PRJNA1118794 | 53519 | 249 | 0.875 | 2.17875 | Bdellovibrio | 958 | Bacteria | Bacteria | 279 | 9.5e-71 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g52769 | i0 | 87.2 | 36.3333333333333 | 250 | 27 | 99 | 5 | 1 | 247 | 3432399 | 3432152 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 9047 | 279 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23977378 | 23977378 | PRJNA1118794_P_NODE_75499_length_229_cov_3.217949_g74749_i0 | PRJNA1118794 | 75499 | 229 | 3.217949 | 7.36910321 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 385 | 1.77e-102 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g74749 | i0 | 97.345 | 83.5371179039301 | 226 | 6 | 99 | 0 | 1 | 226 | 1747 | 1522 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 19130 | 385 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 24456841 | 24456841 | PRJNA1118794_P_NODE_3420_length_783_cov_2.421127_g2727_i0 | PRJNA1118794 | 3420 | 783 | 2.421127 | 18.95742441 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g2727 | i0 | 85.223 | 121.812260536398 | 785 | 102 | 99 | 13 | 2 | 783 | 3251991 | 3251218 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 95379 | 795 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;