contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1505603 | 1505603 | PRJNA1118794_P_NODE_50602_length_250_cov_1.576271_g49852_i0 | PRJNA1118794 | 50602 | 250 | 1.576271 | 3.9406775 | Thermus scotoductus | 37636 | Bacteria | Bacteria | 451 | 1.91e-122 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g49852 | i0 | 99.2 | 5.96 | 250 | 2 | 100 | 0 | 1 | 250 | 2244397 | 2244646 | Thermus scotoductus SA-01, complete genome | blastn | 1490 | 451 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 4853015 | 4853015 | PRJNA1118794_P_NODE_47504_length_253_cov_1.300000_g46754_i0 | PRJNA1118794 | 47504 | 253 | 1.3 | 3.289 | Thermus | 270 | Bacteria | Bacteria | 398 | 2.5599999999999996e-106 | NTclustered | gi|2049910225|gb|CP076325.1| | 88190 | g46754 | i0 | 95.219 | 24.0632411067194 | 251 | 12 | 99 | 0 | 1 | 251 | 1131494 | 1131744 | MAG: Thermus antranikianii isolate RBS10-92 chromosome, complete genome | blastn | 6088 | 398 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus antranikianii | ||
| 7402851 | 7402851 | PRJNA1118794_P_NODE_54626_length_249_cov_0.875000_g53876_i0 | PRJNA1118794 | 54626 | 249 | 0.875 | 2.17875 | Thermus | 270 | Bacteria | Bacteria | 416 | 6.939999999999999e-112 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g53876 | i0 | 96.787 | 43.7630522088353 | 249 | 8 | 100 | 0 | 1 | 249 | 853475 | 853227 | Thermus scotoductus SA-01, complete genome | blastn | 10897 | 416 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 7883861 | 7883861 | PRJNA1118794_P_NODE_58527_length_247_cov_0.885057_g57777_i0 | PRJNA1118794 | 58527 | 247 | 0.885057 | 2.18609079 | Deinococcus proteolyticus | 55148 | Bacteria | Bacteria | 163 | 9.88e-36 | NTclustered | gi|324314064|gb|CP002536.1| | 693977 | g57777 | i0 | 78.884 | 1.01619433198381 | 251 | 45 | 100 | 7 | 1 | 247 | 1504204 | 1503958 | Deinococcus proteolyticus MRP, complete genome | blastn | 251 | 163 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 9158536 | 9158536 | PRJNA1118794_P_NODE_4348_length_682_cov_2.247947_g3633_i0 | PRJNA1118794 | 4348 | 682 | 2.247947 | 15.33099854 | Deinococcus caeni | 569127 | Bacteria | Bacteria | 1230 | 0 | NTclustered | gi|343198716|ref|NR_043473.1| | 569127 | g3633 | i0 | 99.267 | 100.070381231672 | 682 | 4 | 100 | 1 | 1 | 682 | 689 | 9 | Deinococcus caeni strain Ho-08 16S ribosomal RNA, partial sequence | blastn | 68248 | 1230 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus caeni | ||
| 11709722 | 11709722 | PRJNA1118794_P_NODE_64370_length_245_cov_0.895349_g63620_i0 | PRJNA1118794 | 64370 | 245 | 0.895349 | 2.19360505 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 337 | 5.45e-88 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g63620 | i0 | 91.498 | 396.542857142857 | 247 | 17 | 100 | 2 | 1 | 245 | 67907 | 68151 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 97153 | 337 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 14259622 | 14259622 | PRJNA1118794_P_NODE_3332_length_795_cov_3.040166_g2641_i0 | PRJNA1118794 | 3332 | 795 | 3.040166 | 24.1693197 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 1267 | 0 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g2641 | i0 | 95.511 | 336.908176100629 | 802 | 21 | 100 | 12 | 1 | 795 | 714647 | 715440 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 267842 | 1267 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 14259963 | 14259963 | PRJNA1118794_P_NODE_62192_length_245_cov_1.790698_g61442_i0 | PRJNA1118794 | 62192 | 245 | 1.790698 | 4.3872101 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 359 | 1.16e-94 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g61442 | i0 | 93.388 | 3.95510204081633 | 242 | 16 | 99 | 0 | 3 | 244 | 600724 | 600965 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 969 | 359 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 16808040 | 16808040 | PRJNA1118794_P_NODE_59274_length_247_cov_0.885057_g58524_i0 | PRJNA1118794 | 59274 | 247 | 0.885057 | 2.18609079 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 418 | 1.9099999999999998e-112 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g58524 | i0 | 97.166 | 42.4898785425101 | 247 | 7 | 100 | 0 | 1 | 247 | 2106666 | 2106420 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 10495 | 418 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 20151424 | 20151424 | PRJNA1118794_P_NODE_48196_length_251_cov_2.146067_g47446_i0 | PRJNA1118794 | 48196 | 251 | 2.146067 | 5.38662817 | Deinococcus | 1298 | Bacteria | Bacteria | 457 | 4.13e-124 | NTclustered | gi|1142915234|gb|KX832182.1| | 47478 | g47446 | i0 | 99.6 | 100.298804780876 | 250 | 1 | 99 | 0 | 2 | 251 | 471 | 222 | Deinococcus sp. strain 311:FR1_AP2_32 16S ribosomal RNA gene, partial sequence | blastn | 25175 | 457 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 23182757 | 23182757 | PRJNA1118794_P_NODE_25079_length_313_cov_1.183333_g24329_i0 | PRJNA1118794 | 25079 | 313 | 1.183333 | 3.70383229 | Thermus caldilimi | 2483360 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1608424790|gb|CP038452.1| | 2483360 | g24329 | i0 | 100 | 0.0894568690095847 | 28 | 0 | 9 | 0 | 276 | 303 | 1721197 | 1721224 | Thermus caldilimi strain YIM 78456 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus caldilimi |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;