RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1118794 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2781580 2781580 PRJNA1118794_P_NODE_68583_length_243_cov_0.905882_g67833_i0 PRJNA1118794 68583 243 0.905882 2.20129326 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.022   NTclustered gi|9964314|ref|NC_002520.1| 28321 g67833 i0 94.286 0.1440329218107 35 1 14 1 62 95 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
7883286 7883286 PRJNA1118794_P_NODE_13867_length_388_cov_1.428571_g13117_i0 PRJNA1118794 13867 388 1.428571 5.54285548 Cotonvirus japonicum 3059904 Viruses Viruses 52.8 0.037   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g13117 i0 100 0.0721649484536082 28 0 7 0 78 105 450001 449974 Cotonvirus japonicus DNA, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
14259566 14259566 PRJNA1118794_P_NODE_29032_length_296_cov_1.569507_g28282_i0 PRJNA1118794 29032 296 1.569507 4.64574072 Yellowstone lake mimivirus 1586712 Viruses Viruses 52.8 0.027   NTclustered gi|941356135|dbj|LC015646.1| 1586712 g28282 i0 100 0.189189189189189 28 0 9 0 212 239 15476 15503 Yellowstone lake mimivirus DNA, complete genome, isolate: 1 blastn 56 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Yellowstone lake mimivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;