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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA1118794" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 31 ✖

bioproject 1

  • PRJNA1118794 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1505866 1505866 PRJNA1118794_P_NODE_74762_length_238_cov_4.187879_g74012_i0 PRJNA1118794 74762 238 4.187879 9.96715202 Soliformovum irregulare 435424 Evosea other_Eukaryota 159 1.22e-34   NTclustered gi|381139238|emb|HE655045.1| 435424 g74012 i0 79.916 197.857142857143 239 30 99 10 1 237 413 635 Soliformovum irregulare partial 28S rRNA gene, strain ATCC 26826 blastn 47090 159 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
2781347 2781347 PRJNA1118794_P_NODE_4563_length_663_cov_26.940678_g3843_i0 PRJNA1118794 4563 663 26.940678 178.61669514 Ripella sp. 805 1217113 Discosea other_Eukaryota 854 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3843 i0 95.229 82.4811463046757 545 17 82 9 1 541 540 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54685 854 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5333484 5333484 PRJNA1118794_P_NODE_21645_length_329_cov_2.546875_g20895_i0 PRJNA1118794 21645 329 2.546875 8.37921875 Arcyria cinerea 137621 Evosea other_Eukaryota 272 2.1799999999999993e-68   NTclustered gi|2772191487|gb|PQ014921.1| 137621 g20895 i0 83.279 91.5349544072948 305 41 91 6 1 300 152 451 Arcyria cinerea voucher sc32624 translation elongation factor 1-alpha (EF1a) gene, partial cds blastn 30115 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria cinerea
5333786 5333786 PRJNA1118794_P_NODE_43905_length_260_cov_1.647059_g43155_i0 PRJNA1118794 43905 260 1.647059 4.2823534 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 91.6 5.02e-14   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g43155 i0 93.443 5.93076923076923 61 4 23 0 198 258 231 171 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 1542 91.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5334178 5334178 PRJNA1118794_P_NODE_8605_length_480_cov_1.186732_g7861_i0 PRJNA1118794 8605 480 1.186732 5.6963136 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 593 6.189999999999998e-165   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g7861 i0 89.3 33.5166666666667 486 35 99 11 1 479 1460 1935 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 16088 593 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
6127906 6127906 PRJNA1118794_P_NODE_45105_length_258_cov_1.221622_g44355_i0 PRJNA1118794 45105 258 1.221622 3.15178476 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 231 2.8099999999999996e-56   NTclustered gi|290054|gb|L16578.1|DDITATBPA 44689 g44355 i0 82.879 29.5 257 44 99 0 2 258 732 988 Dictyostelium discoideum HIV1 TAT-binding protein homologous protein mRNA, complete cds blastn 7611 231 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6609018 6609018 PRJNA1118794_P_NODE_6346_length_558_cov_2.519588_g5607_i0 PRJNA1118794 6346 558 2.519588 14.05930104 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 737 0   NTclustered gi|354720326|gb|HQ687485.1| 1105345 g5607 i0 90.78 37.8458781362007 564 35 99 12 3 558 566 12 Vexillifera bacillipedes strain CCAP 1590/1 small subunit ribosomal RNA gene, partial sequence blastn 21118 737 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
7883303 7883303 PRJNA1118794_P_NODE_15387_length_372_cov_8.749164_g14637_i0 PRJNA1118794 15387 372 8.749164 32.54689008 Tubulinea group 04 sp. P18 1215998 Tubulinea other_Eukaryota 172 2.5999999999999996e-38   NTclustered gi|399764278|gb|JQ271789.1| 1215998 g14637 i0 78.652 34.8951612903226 267 51 72 5 1 267 1429 1689 Tubulinea group 04 sp. P18 18S ribosomal RNA gene, partial sequence blastn 12981 172 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. P18
7883860 7883860 PRJNA1118794_P_NODE_58487_length_247_cov_0.885057_g57737_i0 PRJNA1118794 58487 247 0.885057 2.18609079 Dictyostelium discoideum 44689 Evosea other_Eukaryota 156 1.65e-33   NTclustered gi|66828282|ref|XM_642404.1| 352472 g57737 i0 87.97 4.88259109311741 133 14 53 2 103 234 209 340 Dictyostelium discoideum AX4 3-methyl-2-oxobutanoate dehydrogenase (bkdB) mRNA, complete cds blastn 1206 156 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
9158910 9158910 PRJNA1118794_P_NODE_7728_length_505_cov_22.074074_g6985_i0 PRJNA1118794 7728 505 22.074074 111.4740737 Ripella sp. GP2 1217115 Discosea other_Eukaryota 804 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g6985 i0 95.464 100.958415841584 507 18 100 5 1 505 1072 569 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 50984 804 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
10433851 10433851 PRJNA1118794_P_NODE_16789_length_360_cov_2.411150_g16039_i0 PRJNA1118794 16789 360 2.41115 8.68014 Dictyostelium discoideum 44689 Evosea other_Eukaryota 163 1.51e-35   NTclustered gi|268638233|ref|XM_640868.3| 352472 g16039 i0 86.577 1.46666666666667 149 18 41 2 28 175 155 302 Dictyostelium discoideum AX4 mago nashi protein (magoh) mRNA, complete cds blastn 528 163 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10434276 10434276 PRJNA1118794_P_NODE_47289_length_253_cov_1.711111_g46539_i0 PRJNA1118794 47289 253 1.711111 4.32911083 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 158 4.729999999999999e-34   NTclustered gi|470384206|ref|XM_004333979.1| 1257118 g46539 i0 79.149 1.98418972332016 235 44 92 5 4 235 708 476 Acanthamoeba castellanii str. Neff alphaactinin, putative (ACA1_321210), partial mRNA blastn 502 158 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10434627 10434627 PRJNA1118794_P_NODE_8349_length_487_cov_2.743961_g7606_i0 PRJNA1118794 8349 487 2.743961 13.36309007 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 556 8.25e-154   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g7606 i0 89.865 42.9425051334702 444 29 90 13 43 481 793 1225 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 20913 556 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
10434648 10434648 PRJNA1118794_P_NODE_9529_length_457_cov_1.802083_g8781_i0 PRJNA1118794 9529 457 1.802083 8.23551931 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 2.65e-4   NTclustered gi|66801564|ref|XM_629706.1| 352472 g8781 i0 100 0.691466083150985 32 0 7 0 391 422 677 646 Dictyostelium discoideum AX4 hypothetical protein (gcvT) mRNA, complete cds blastn 316 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13778349 13778349 PRJNA1118794_P_NODE_65291_length_244_cov_0.900585_g64541_i0 PRJNA1118794 65291 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 1.01e-10   NTclustered gi|6226760|gb|L35321.2|DDMYOVII 44689 g64541 i0 87.324 1.02868852459016 71 7 29 2 107 176 400 331 Dictyostelium discoideum class VII unconventional myosin (myoI) gene, complete cds blastn 251 80.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
14259681 14259681 PRJNA1118794_P_NODE_37612_length_274_cov_1.293532_g36862_i0 PRJNA1118794 37612 274 1.293532 3.54427768 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 8.68e-32   NTclustered gi|470517203|ref|XM_004353125.1| 1257118 g36862 i0 81.026 20.3175182481752 195 31 70 5 36 227 1213 1404 Acanthamoeba castellanii str. Neff alanineglyoxylate aminotransferase (ACA1_072820), partial mRNA blastn 5567 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14259866 14259866 PRJNA1118794_P_NODE_5392_length_608_cov_1.801869_g4661_i0 PRJNA1118794 5392 608 1.801869 10.95536352 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 577 8.04e-160   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4661 i0 84.08 98.0493421052632 603 90 99 5 3 602 1171 1770 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 59614 577 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14260065 14260065 PRJNA1118794_P_NODE_71792_length_242_cov_0.911243_g71042_i0 PRJNA1118794 71792 242 0.911243 2.20520806 Cavenderia fasciculata 261658 Evosea other_Eukaryota 99 2.76e-16   NTclustered gi|470238249|ref|XM_004353731.1| 261658 g71042 i0 80.147 1.56198347107438 136 23 55 4 3 136 479 346 Cavenderia fasciculata eukaryotic release factor 3 (eRF3), partial mRNA blastn 378 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
15533407 15533407 PRJNA1118794_P_NODE_4473_length_672_cov_6.854758_g3754_i0 PRJNA1118794 4473 672 6.854758 46.06397376 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 202 6.279999999999998e-47   NTclustered gi|511487963|gb|JX898537.1| 1260765 g3754 i0 81.569 24.0714285714286 255 38 38 7 247 498 356 108 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 16176 202 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
16807504 16807504 PRJNA1118794_P_NODE_16514_length_363_cov_1.058621_g15764_i0 PRJNA1118794 16514 363 1.058621 3.84279423 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.01   NTclustered gi|831767348|ref|XM_012896619.1| 1410327 g15764 i0 100 0.0798898071625344 29 0 8 0 71 99 573 545 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
16807883 16807883 PRJNA1118794_P_NODE_45214_length_257_cov_2.500000_g44464_i0 PRJNA1118794 45214 257 2.5 6.425 Dictyostelium purpureum 5786 Evosea other_Eukaryota 189 1.71e-43   NTclustered gi|330793229|ref|XM_003284640.1| 5786 g44464 i0 82.407 12.4124513618677 216 38 84 0 4 219 328 113 Dictyostelium purpureum uncharacterized protein (rasD), mRNA blastn 3190 189 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19356976 19356976 PRJNA1118794_P_NODE_72036_length_241_cov_2.863095_g71286_i0 PRJNA1118794 72036 241 2.863095 6.90005895 Vexillifera westveldii 1678067 Discosea other_Eukaryota 429 8.58e-116   NTclustered gi|861553791|gb|KP719187.1| 1678067 g71286 i0 98.76 86.6887966804979 242 2 100 1 1 241 974 733 Vexillifera westveldii strain A18WVB clone 10 small subunit ribosomal RNA gene, partial sequence blastn 20892 429 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera westveldii
20151297 20151297 PRJNA1118794_P_NODE_1516_length_1193_cov_6.308036_g1045_i0 PRJNA1118794 1516 1193 6.308036 75.25486948 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 279 5.1300000000000006e-70   NTclustered gi|441475833|emb|FN562425.4| 688089 g1045 i0 82.006 25.8709136630344 339 49 28 8 849 1186 862 1189 Amoebozoa sp. SZA36 18S rRNA gene, isolate SZA36 blastn 30864 279 1 Eukaryota Amoebozoa             Amoebozoa sp. SZA36
20631972 20631972 PRJNA1118794_P_NODE_5457_length_604_cov_2.359699_g4726_i0 PRJNA1118794 5457 604 2.359699 14.25258196 Platyamoeba placida 3454475 Discosea other_Eukaryota 778 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g4726 i0 89.901 99.521523178808 604 61 100 0 1 604 1126 523 Platyamoeba placida actin mRNA, partial cds blastn 60111 778 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
21907292 21907292 PRJNA1118794_P_NODE_15718_length_369_cov_3.780405_g14968_i0 PRJNA1118794 15718 369 3.780405 13.94969445 Dictyostelium purpureum 5786 Evosea other_Eukaryota 176 1.99e-39   NTclustered gi|330790679|ref|XM_003283376.1| 5786 g14968 i0 83.249 26.3956639566396 197 27 53 4 1 194 578 771 Dictyostelium purpureum 60S ribosomal protein L8 (DICPUDRAFT_91096), mRNA blastn 9740 176 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21907660 21907660 PRJNA1118794_P_NODE_4178_length_697_cov_4.173077_g3467_i0 PRJNA1118794 4178 697 4.173077 29.08634669 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 379 2.81e-100   NTclustered gi|470380222|ref|XM_004333620.1| 1257118 g3467 i0 81.466 60.2109038737446 464 84 66 2 59 521 12 474 Acanthamoeba castellanii str. Neff ran, putative (ACA1_260190), partial mRNA blastn 41967 379 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23182537 23182537 PRJNA1118794_P_NODE_10439_length_437_cov_7.079670_g9691_i0 PRJNA1118794 10439 437 7.07967 30.9381579 Entamoeba nuttalli 412467 Evosea other_Eukaryota 196 1.84e-45   NTclustered gi|672810997|ref|XM_008862315.1| 1076696 g9691 i0 80.228 4.66361556064073 263 50 60 2 137 398 268 7 Entamoeba nuttalli P19 ribosomal S17 protein partial mRNA blastn 2038 196 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
23183273 23183273 PRJNA1118794_P_NODE_69639_length_242_cov_1.775148_g68889_i0 PRJNA1118794 69639 242 1.775148 4.29585816 Dictyostelium purpureum 5786 Evosea other_Eukaryota 171 5.77e-38   NTclustered gi|330842692|ref|XM_003293259.1| 5786 g68889 i0 81.429 14.6528925619835 210 37 86 2 6 214 1269 1477 Dictyostelium purpureum elongation factor 2 (DICPUDRAFT_58424), mRNA blastn 3546 171 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
24457339 24457339 PRJNA1118794_P_NODE_7480_length_513_cov_18.218182_g6739_i0 PRJNA1118794 7480 513 18.218182 93.45927366 Ripella platypodia 2047821 Discosea other_Eukaryota 798 0   NTclustered gi|1269228373|gb|MF683498.1| 2047821 g6739 i0 94.798 101.251461988304 519 15 100 9 1 513 1139 1651 Ripella platypodia clone 26.9.30 18S ribosomal RNA gene, partial sequence blastn 51942 798 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
24457386 24457386 PRJNA1118794_P_NODE_9160_length_466_cov_1.625954_g8412_i0 PRJNA1118794 9160 466 1.625954 7.57694564 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 5.419999999999999e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8412 i0 80.464 64.4399141630901 302 59 65 0 103 404 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25251310 25251310 PRJNA1118794_P_NODE_49680_length_251_cov_0.865169_g48930_i0 PRJNA1118794 49680 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 154 6.06e-33   NTclustered gi|330805183|ref|XM_003290518.1| 5786 g48930 i0 78.75 14 240 43 94 7 1 236 1252 1017 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_95166), partial mRNA blastn 3514 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;