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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1115053" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1115053 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1503229 1503229 PRJNA1115053_S_NODE_39602_length_365_cov_2.229814_g37785_i0 PRJNA1115053 39602 365 2.229814 8.1388211 Spironucleus vortens 58336 Fornicata other_Eukaryota 217 1.16e-51   NTclustered gi|5566180|gb|AF159517.1|AF159517 58336 g37785 i0 77.809 45.9205479452055 356 75 97 3 1 354 704 1057 Spironucleus vortens enolase gene, partial cds blastn 16761 217 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus vortens
1503807 1503807 PRJNA1115053_S_NODE_62782_length_309_cov_19.063910_g60965_i0 PRJNA1115053 62782 309 19.06391 58.9074819 Hexamita inflata 28002 Fornicata other_Eukaryota 86.1 2.84e-12   NTclustered gi|459348792|gb|KC249997.1| 28002 g60965 i0 84.884 13.1909385113269 86 11 27 2 226 309 2853 2768 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 4076 86.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
2775004 2775004 PRJNA1115053_S_NODE_181823_length_202_cov_1.509434_g180006_i0 PRJNA1115053 181823 202 1.509434 3.04905668 Giardia duodenalis 5741 Fornicata other_Eukaryota 159 1.01e-34   NTclustered gi|1595200664|gb|MK043783.1| 5741 g180006 i0 82.955 1.91089108910891 176 30 87 0 3 178 690 515 Giardia intestinalis isolate P458 thioredoxin peroxidase (prx1) gene, complete cds blastn 386 159 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
5325477 5325477 PRJNA1115053_S_NODE_10685_length_576_cov_5.459662_g9043_i0 PRJNA1115053 10685 576 5.459662 31.44765312 Spironucleus muris 39710 Fornicata other_Eukaryota 928 0   NTclustered gi|157932098|gb|EU043230.1| 39710 g9043 i0 98.853 83.4947916666667 523 1 90 5 58 576 1353 832 Spironucleus muris small subunit ribosomal RNA gene, partial sequence blastn 48093 928 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus muris
9156328 9156328 PRJNA1115053_S_NODE_4348_length_811_cov_7.537760_g3274_i0 PRJNA1115053 4348 811 7.53776 61.1312336 Spironucleus muris 39710 Fornicata other_Eukaryota 1382 0   NTclustered gi|157932098|gb|EU043230.1| 39710 g3274 i0 99.604 43.5635018495684 758 1 93 2 1 757 757 1 Spironucleus muris small subunit ribosomal RNA gene, partial sequence blastn 35330 1382 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus muris
11703858 11703858 PRJNA1115053_S_NODE_214810_length_188_cov_1.200000_g212993_i0 PRJNA1115053 214810 188 1.2 2.256 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 215 1.94e-51   NTclustered gi|2794870705|ref|XM_067904278.1| 348837 g212993 i0 87.302 6.07446808510638 189 22 100 2 1 188 359 172 Spironucleus salmonicida histone H3 (SS50377_20335), partial mRNA blastn 1142 215 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
11707137 11707137 PRJNA1115053_S_NODE_3890_length_847_cov_15.299751_g2890_i0 PRJNA1115053 3890 847 15.299751 129.58889097 Giardia muris 5742 Fornicata other_Eukaryota 152 8.17e-32   NTclustered gi|9378|emb|X65063.1| 5742 g2890 i0 82.659 1.98110979929162 173 28 20 2 153 324 5286 5115 G.muris ribosomal RNA operon DNA encoding 16S, 23S and 5.8S ribosomal RNA blastn 1678 152 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
14253514 14253514 PRJNA1115053_S_NODE_188572_length_199_cov_1.230769_g186755_i0 PRJNA1115053 188572 199 1.230769 2.44923031 Spironucleus muris 39710 Fornicata other_Eukaryota 363 7.019999999999998e-96   NTclustered gi|2522339|gb|U94405.1|SMU94405 39710 g186755 i0 99.497 4.07035175879397 199 1 100 0 1 199 509 311 Spironucleus muris elongation factor 1 alpha gene, partial cds blastn 810 363 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus muris
15526560 15526560 PRJNA1115053_S_NODE_16753_length_488_cov_12.505618_g14970_i0 PRJNA1115053 16753 488 12.505618 61.02741584 Hexamita inflata 28002 Fornicata other_Eukaryota 200 1.61e-46   NTclustered gi|459348792|gb|KC249997.1| 28002 g14970 i0 90.26 7.44877049180328 154 13 75 2 1 152 2129 2282 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 3635 200 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;