RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1115053" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 8 ✖

bioproject 1

  • PRJNA1115053 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1500522 1500522 PRJNA1115053_S_NODE_241922_length_178_cov_1.777778_g240105_i0 PRJNA1115053 241922 178 1.777778 3.16444484 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.004   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g240105 i0 100 1.30337078651685 29 0 16 0 3 31 1 29 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 232 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
12982637 12982637 PRJNA1115053_S_NODE_5231_length_755_cov_24.248596_g4034_i0 PRJNA1115053 5231 755 24.248596 183.0768998 Erythroparvovirus ungulate1 3052194 Viruses Viruses 1262 0   NTclustered gi|2277478564|gb|MZ502233.1| 172297 g4034 i0 96.941 9.53907284768212 752 23 99 0 4 755 2464 1713 Bovine parvovirus 3 isolate BCS1/USA nonstructural protein and structural protein genes, complete cds blastn 7202 1262 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
15532134 15532134 PRJNA1115053_S_NODE_80993_length_281_cov_3.542017_g79176_i0 PRJNA1115053 80993 281 3.542017 9.95306777 Erythroparvovirus ungulate1 3052194 Viruses Viruses 455 1.69e-123   NTclustered gi|2277478564|gb|MZ502233.1| 172297 g79176 i0 96.057 5.95729537366548 279 11 99 0 1 279 167 445 Bovine parvovirus 3 isolate BCS1/USA nonstructural protein and structural protein genes, complete cds blastn 1674 455 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
18080428 18080428 PRJNA1115053_S_NODE_5275_length_753_cov_4.414085_g4073_i0 PRJNA1115053 5275 753 4.414085 33.23806005 Erythroparvovirus ungulate1 3052194 Viruses Viruses 1258 0   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g4073 i0 96.813 9.97211155378486 753 24 100 0 1 753 947 1699 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 7509 1258 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
19348382 19348382 PRJNA1115053_S_NODE_1036_length_1646_cov_5.839052_g611_i0 PRJNA1115053 1036 1646 5.839052 96.11079592 Erythroparvovirus ungulate1 3052194 Viruses Viruses 2800 0   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g611 i0 97.386 8.82624544349939 1645 43 99 0 2 1646 4528 2884 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 14528 2800 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
24450093 24450093 PRJNA1115053_S_NODE_163620_length_211_cov_2.547619_g161803_i0 PRJNA1115053 163620 211 2.547619 5.37547609 Erythroparvovirus ungulate1 3052194 Viruses Viruses 231 2.22e-56   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g161803 i0 91.176 4.98104265402844 170 15 100 0 42 211 118 287 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 1051 231 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
24450228 24450228 PRJNA1115053_S_NODE_168780_length_209_cov_0.716867_g166963_i0 PRJNA1115053 168780 209 0.716867 1.49825203 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.005   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g166963 i0 100 0.138755980861244 29 0 14 0 1 29 3116 3088 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
24452796 24452796 PRJNA1115053_S_NODE_27880_length_411_cov_3.437500_g26069_i0 PRJNA1115053 27880 411 3.4375 14.128125 Erythroparvovirus ungulate1 3052194 Viruses Viruses 571 2.4499999999999996e-158   NTclustered gi|1333742271|gb|MG026728.1| 172297 g26069 i0 98.758 6.48418491484185 322 2 78 2 90 411 5333 5014 Bovine parvovirus 3 isolate ujs497 nonstructural protein and structural protein genes, complete cds blastn 2665 571 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;