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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA1115053" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 19 ✖

bioproject 1

  • PRJNA1115053 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1497944 1497944 PRJNA1115053_S_NODE_13442_length_529_cov_4.851852_g11712_i0 PRJNA1115053 13442 529 4.851852 25.66629708 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 1.08e-28   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g11712 i0 87.603 22.1625708884688 121 15 23 0 208 328 4131 4251 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11724 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
2300068 2300068 PRJNA1115053_S_NODE_72682_length_293_cov_3.404000_g70865_i0 PRJNA1115053 72682 293 3.404 9.97372 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 91.6 5.76e-14   NTclustered gi|462269548|gb|KC353356.1| 1295593 g70865 i0 78.767 29.221843003413 146 23 48 7 143 283 496 638 Reclinomonas americana ATCC 50633 mitochondrion, complete genome blastn 8562 91.6 1 Eukaryota Discoba       Jakobida Histionidae Reclinomonas Reclinomonas americana
4050316 4050316 PRJNA1115053_S_NODE_143544_length_223_cov_4.722222_g141727_i0 PRJNA1115053 143544 223 4.722222 10.53055506 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 110 1.16e-19   NTclustered gi|560190589|gb|KF633467.1| 91374 g141727 i0 84.615 36.4843049327354 117 11 52 6 109 223 2588 2477 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 8136 110 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
4852681 4852681 PRJNA1115053_S_NODE_50344_length_336_cov_1.515358_g48527_i0 PRJNA1115053 50344 336 1.515358 5.09160288 Entosiphon 101492 Euglenozoa other_Eukaryota 296 1.33e-75   NTclustered gi|41400272|gb|AY425008.1| 259048 g48527 i0 89.54 4.91369047619048 239 18 71 7 29 266 1191 959 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 1651 296 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
6601219 6601219 PRJNA1115053_S_NODE_130626_length_232_cov_4.158730_g128809_i0 PRJNA1115053 130626 232 4.15873 9.6482536 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 252 1.91e-62   NTclustered gi|2124390247|ref|XM_044710001.1| 5763 g128809 i0 86.726 3.74137931034483 226 30 97 0 7 232 67 292 Naegleria fowleri uncharacterized protein (FDP41_006373), partial mRNA blastn 868 252 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
7880985 7880985 PRJNA1115053_S_NODE_347147_length_151_cov_3.064815_g345330_i0 PRJNA1115053 347147 151 3.064815 4.62787065 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 78.7 2.03e-10   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g345330 i0 92.593 68.6158940397351 54 4 36 0 16 69 14256 14309 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 10361 78.7 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
8677410 8677410 PRJNA1115053_S_NODE_102887_length_256_cov_2.197183_g101070_i0 PRJNA1115053 102887 256 2.197183 5.62478848 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 427 3.309999999999999e-115   NTclustered gi|1121487417|gb|KX068999.1| 166958 g101070 i0 100 45.1953125 231 0 90 0 1 231 365 135 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 11570 427 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
8677432 8677432 PRJNA1115053_S_NODE_117787_length_242_cov_12.718593_g115970_i0 PRJNA1115053 117787 242 12.718593 30.77899506 Naegleria 5761 Heterolobosea other_Eukaryota 169 2.07e-37   NTclustered gi|2031946985|emb|OD958550.1| 5763 g115970 i0 80.631 561.694214876033 222 40 91 3 1 220 3021 3241 Naegleria fowleri Karachi_NF001 strain blastn 135930 169 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10428868 10428868 PRJNA1115053_S_NODE_22529_length_441_cov_42.198492_g20723_i0 PRJNA1115053 22529 441 42.198492 186.09534972 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 102 4.17e-17   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g20723 i0 79.245 11.4897959183673 159 24 34 6 221 371 3666 3823 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5067 102 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
11227584 11227584 PRJNA1115053_S_NODE_132249_length_231_cov_2.505319_g130432_i0 PRJNA1115053 132249 231 2.505319 5.78728689 Entosiphon 101492 Euglenozoa other_Eukaryota 318 1.84e-82   NTclustered gi|37542663|gb|AY061999.1| 101493 g130432 i0 91.703 3.96536796536797 229 19 99 0 3 231 1833 2061 Entosiphon sulcatum small subunit ribosomal RNA gene, partial sequence blastn 916 318 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
12976215 12976215 PRJNA1115053_S_NODE_100651_length_258_cov_3.511628_g98834_i0 PRJNA1115053 100651 258 3.511628 9.06000024 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 217 7.87e-52   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g98834 i0 90.798 55.1317829457364 163 14 63 1 1 163 3062 2901 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14224 217 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13778043 13778043 PRJNA1115053_S_NODE_70751_length_296_cov_3.537549_g68934_i0 PRJNA1115053 70751 296 3.537549 10.47114504 Bodo 5712 Euglenozoa other_Eukaryota 547 2.8799999999999986e-151   NTclustered gi|20331094|gb|AY028452.1| 75058 g68934 i0 100 86.0101351351351 296 0 100 0 1 296 1040 1335 Bodo saltans 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25459 547 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
14253800 14253800 PRJNA1115053_S_NODE_200812_length_193_cov_4.453333_g198995_i0 PRJNA1115053 200812 193 4.453333 8.59493269 Trypanosomatidae sp. 1737640 Euglenozoa other_Eukaryota 311 2.49e-80   NTclustered gi|2022380702|gb|MW874579.1| 1737640 g198995 i0 95.833 156.170984455959 192 8 99 0 1 192 307 116 Trypanosomatidae sp. isolate DN36 large subunit ribosomal RNA gene, partial sequence blastn 30141 311 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae   Trypanosomatidae sp.
14255593 14255593 PRJNA1115053_S_NODE_27892_length_411_cov_3.065217_g26081_i0 PRJNA1115053 27892 411 3.065217 12.59804187 Jakoba bahamiensis 221721 Root_unresolved Root_unresolved 76.8 2.34e-9   NTclustered gi|501595162|ref|NC_021126.1| 221721 g26081 i0 79.13 11.7712895377129 115 20 27 4 11 123 1527 1639 Jakoba bahamiensis strain ATCC 50695 mitochondrion, complete genome blastn 4838 76.8 1 Eukaryota Discoba       Jakobida Jakobidae Jakoba Jakoba bahamiensis
15052059 15052059 PRJNA1115053_S_NODE_232152_length_181_cov_2.782609_g230335_i0 PRJNA1115053 232152 181 2.782609 5.03652229 Trypanosoma 5690 Euglenozoa other_Eukaryota 174 3.14e-39   NTclustered gi|46091659|dbj|AB175623.1| 169531 g230335 i0 92.562 80.3093922651934 121 9 67 0 61 181 7457 7337 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 14536 174 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
16326879 16326879 PRJNA1115053_S_NODE_205673_length_191_cov_3.554054_g203856_i0 PRJNA1115053 205673 191 3.554054 6.78824314 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 353 4.02e-93   NTclustered gi|37051004|emb|AJ550994.1| 225656 g203856 i0 100 54.8376963350785 191 0 100 0 1 191 1588 1778 Paravahlkampfia sp. li3_03 partial 18S rRNA gene, isolate li3_03 blastn 10474 353 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. li3_03
16802382 16802382 PRJNA1115053_S_NODE_220974_length_185_cov_3.070423_g219157_i0 PRJNA1115053 220974 185 3.070423 5.68028255 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 117 5.5200000000000005e-22   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g219157 i0 78.607 2.77297297297297 201 26 100 12 1 185 13448 13647 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 513 117 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
20624753 20624753 PRJNA1115053_S_NODE_151677_length_218_cov_2.857143_g149860_i0 PRJNA1115053 151677 218 2.857143 6.22857174 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 54.7 0.005   NTclustered gi|342182322|emb|HE575321.1| 1068625 g149860 i0 100 0.261467889908257 29 0 13 0 89 117 272840 272812 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 8 blastn 57 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
23976995 23976995 PRJNA1115053_S_NODE_51199_length_334_cov_1.536082_g49382_i0 PRJNA1115053 51199 334 1.536082 5.13051388 Bodo 5712 Euglenozoa other_Eukaryota 468 2.64e-127   NTclustered gi|20331091|gb|AY028449.1| 155205 g49382 i0 94.983 89.9311377245509 299 13 89 2 38 334 2158 1860 Bodo sp. ATCC 50149 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30037 470 0.995744680851064 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo sp. ATCC 50149

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;