RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1115053" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1115053 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18074286 18074286 PRJNA1115053_S_NODE_112735_length_247_cov_1.647059_g110918_i0 PRJNA1115053 112735 247 1.647059 4.06823573 Candidatus Dependentiae bacterium Noda2021 2891165 Bacteria Bacteria 396 8.95e-106   NTclustered gi|2131577866|dbj|AP025250.1| 2891165 g110918 i0 98.23 31.6396761133603 226 4 91 0 4 229 217655 217430 Candidatus Dependentiae bacterium Noda2021 DNA, complete genome blastn 7815 396 1 Bacteria Bacteria candidate phyla             Candidatus Dependentiae bacterium Noda2021
23177715 23177715 PRJNA1115053_S_NODE_226559_length_183_cov_2.442857_g224742_i0 PRJNA1115053 226559 183 2.442857 4.47042831 Candidatus Dependentiae bacterium Noda2021 2891165 Bacteria Bacteria 298 1.81e-76   NTclustered gi|2131577866|dbj|AP025250.1| 2891165 g224742 i0 99.39 241.79781420765 164 1 90 0 20 183 219029 218866 Candidatus Dependentiae bacterium Noda2021 DNA, complete genome blastn 44249 298 1 Bacteria Bacteria candidate phyla             Candidatus Dependentiae bacterium Noda2021

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;