contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA1113956" and tax_clade = "Embryophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221976 | 221976 | PRJNA1113956_P_NODE_9381_length_465_cov_0.742347_g9042_i0 | PRJNA1113956 | 9381 | 465 | 0.742347 | 3.45191355 | Dioscorea cayenensis | 29710 | Plants | Plants | 793 | 0 | NTclustered | gi|1221815295|dbj|LC219378.1| | 55577 | g9042 | i0 | 97.419 | 85.9741935483871 | 465 | 12 | 100 | 0 | 1 | 465 | 9203 | 8739 | Dioscorea rotundata mitochondrial DNA, contig: TDr_Mt_scaffold5_size12031, cultivar: TDr96_F1 | blastn | 39978 | 793 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Dioscoreales | Dioscoreaceae | Dioscorea | Dioscorea cayenensis | |
| 1496722 | 1496722 | PRJNA1113956_P_NODE_21382_length_245_cov_1.511628_g21042_i0 | PRJNA1113956 | 21382 | 245 | 1.511628 | 3.7034886 | Prunus dulcis | 3755 | Plants | Plants | 52.8 | 0.022 | NTclustered | gi|2699132183|emb|OZ022199.1| | 3755 | g21042 | i0 | 100 | 0.114285714285714 | 28 | 0 | 11 | 0 | 204 | 231 | 3711757 | 3711784 | Prunus dulcis genome assembly, chromosome: 3 | blastn | 28 | 52.8 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Rosales | Rosaceae | Prunus | Prunus dulcis | |
| 5324951 | 5324951 | PRJNA1113956_P_NODE_5445_length_723_cov_6.470769_g5138_i0 | PRJNA1113956 | 5445 | 723 | 6.470769 | 46.78365987 | Cicer arietinum | 3827 | Plants | Plants | 73.1 | 5.55e-8 | NTclustered | gi|1535893373|ref|XM_004509673.3| | 3827 | g5138 | i0 | 87.5 | 0.20746887966805 | 64 | 6 | 9 | 2 | 478 | 540 | 757 | 695 | PREDICTED: Cicer arietinum glycine-rich cell wall structural protein 1.0-like (LOC101508402), mRNA | blastn | 150 | 73.1 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Fabales | Fabaceae | Cicer | Cicer arietinum | |
| 7874729 | 7874729 | PRJNA1113956_P_NODE_11167_length_402_cov_12.258359_g10827_i0 | PRJNA1113956 | 11167 | 402 | 12.258359 | 49.27860318 | Panicum hallii | 206008 | Plants | Plants | 56.5 | 0.003 | NTclustered | gi|1435173994|ref|XM_025967816.1| | 206008 | g10827 | i0 | 96.97 | 0.082089552238806 | 33 | 1 | 8 | 0 | 86 | 118 | 539 | 507 | PREDICTED: Panicum hallii endochitinase A-like (LOC112899373), mRNA | blastn | 33 | 56.5 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Poales | Poaceae | Panicum | Panicum hallii | |
| 10425535 | 10425535 | PRJNA1113956_P_NODE_20549_length_248_cov_0.880000_g20209_i0 | PRJNA1113956 | 20549 | 248 | 0.88 | 2.1824 | Ziziphus jujuba | 326968 | Plants | Plants | 52.8 | 0.022 | NTclustered | gi|2739574733|gb|CP157407.1| | 326968 | g20209 | i0 | 100 | 0.112903225806452 | 28 | 0 | 11 | 0 | 84 | 111 | 15004542 | 15004515 | Ziziphus jujuba isolate TW-2024b chromosome 05 | blastn | 28 | 52.8 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Rosales | Rhamnaceae | Ziziphus | Ziziphus jujuba | |
| 12502677 | 12502677 | PRJNA1113956_P_NODE_19330_length_255_cov_1.368132_g18990_i0 | PRJNA1113956 | 19330 | 255 | 1.368132 | 3.4887366 | Malus | 3749 | Plants | Plants | 52.8 | 0.023 | NTclustered | gi|2878365103|ref|XM_008366767.4| | 3750 | g18990 | i0 | 96.875 | 0.501960784313725 | 32 | 0 | 12 | 1 | 69 | 99 | 1338 | 1369 | PREDICTED: Malus domestica uncharacterized protein (LOC103428644), transcript variant X2, mRNA | blastn | 128 | 52.8 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Rosales | Rosaceae | Malus | Malus domestica | |
| 14250888 | 14250888 | PRJNA1113956_P_NODE_17652_length_277_cov_1.696078_g17312_i0 | PRJNA1113956 | 17652 | 277 | 1.696078 | 4.69813606 | Medicago truncatula | 3880 | Plants | Plants | 52.8 | 0.025 | NTclustered | gi|37654168|gb|AC144502.5| | 3880 | g17312 | i0 | 100 | 0.101083032490975 | 28 | 0 | 10 | 0 | 248 | 275 | 30246 | 30219 | Medicago truncatula clone mth2-5p10, complete sequence | blastn | 28 | 52.8 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Fabales | Fabaceae | Medicago | Medicago truncatula | |
| 14250968 | 14250968 | PRJNA1113956_P_NODE_22812_length_241_cov_0.916667_g22472_i0 | PRJNA1113956 | 22812 | 241 | 0.916667 | 2.20916747 | Solanum lycopersicum | 4081 | Plants | Plants | 344 | 3.199999999999999e-90 | NTclustered | gi|15418711|gb|AY007367.1| | 4081 | g22472 | i0 | 92.5 | 312.775933609958 | 240 | 18 | 100 | 0 | 1 | 240 | 12177 | 11938 | Lycopersicon esculentum tospovirus resistance protein C (Sw5-c), tospovirus resistance protein D (Sw5-d), and tospovirus resistance protein E (Sw5-e) genes, complete cds | blastn | 75379 | 344 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Solanales | Solanaceae | Solanum | Solanum lycopersicum | |
| 16799036 | 16799036 | PRJNA1113956_P_NODE_14914_length_319_cov_1.252033_g14574_i0 | PRJNA1113956 | 14914 | 319 | 1.252033 | 3.99398527 | Ipomoea triloba | 35885 | Plants | Plants | 52.8 | 0.03 | NTclustered | gi|1766767796|ref|XR_004100687.1| | 35885 | g14574 | i0 | 100 | 0.175548589341693 | 28 | 0 | 9 | 0 | 218 | 245 | 2880 | 2853 | PREDICTED: Ipomoea triloba uncharacterized LOC116031872 (LOC116031872), transcript variant X7, ncRNA | blastn | 56 | 52.8 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Solanales | Convolvulaceae | Ipomoea | Ipomoea triloba | |
| 18073644 | 18073644 | PRJNA1113956_P_NODE_2635_length_1142_cov_3.287184_g2433_i0 | PRJNA1113956 | 2635 | 1142 | 3.287184 | 37.53964128 | Trichophorum cespitosum | 76515 | Plants | Plants | 54.7 | 0.032 | NTclustered | gi|2919517562|emb|OZ238292.1| | 76515 | g2433 | i0 | 96.875 | 0.0280210157618214 | 32 | 1 | 3 | 0 | 217 | 248 | 1264690 | 1264659 | Trichophorum cespitosum genome assembly, chromosome: 24 | blastn | 32 | 54.7 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Poales | Cyperaceae | Trichophorum | Trichophorum cespitosum | |
| 24448186 | 24448186 | PRJNA1113956_P_NODE_9040_length_479_cov_87.581281_g8701_i0 | PRJNA1113956 | 9040 | 479 | 87.581281 | 419.51433599 | Medicago truncatula | 3880 | Plants | Plants | 215 | 5.62e-51 | NTclustered | gi|217075589|gb|BT053496.1| | 3880 | g8701 | i0 | 81.679 | 30.9227557411274 | 262 | 44 | 54 | 4 | 135 | 394 | 191 | 450 | Medicago truncatula clone MTYFP_FQ_FR_FS1G-I-6 unknown mRNA | blastn | 14812 | 215 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Fabales | Fabaceae | Medicago | Medicago truncatula |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;