contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA1112809" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1494944 | 1494944 | PRJNA1112809_P_NODE_195262_length_238_cov_2.363636_g191987_i0 | PRJNA1112809 | 195262 | 238 | 2.363636 | 5.62545368 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 329 | 8.82e-86 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g191987 | i0 | 91.667 | 229.247899159664 | 240 | 17 | 100 | 3 | 1 | 238 | 2750210 | 2750448 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 54561 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4048202 | 4048202 | PRJNA1112809_P_NODE_69564_length_422_cov_1.816619_g66289_i0 | PRJNA1112809 | 69564 | 422 | 1.816619 | 7.66613218 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 527 | 5.539999999999998e-145 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g66289 | i0 | 89.448 | 456.137440758294 | 417 | 44 | 99 | 0 | 4 | 420 | 4129140 | 4129556 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 192490 | 527 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4048609 | 4048609 | PRJNA1112809_P_NODE_90984_length_351_cov_2.884892_g87709_i0 | PRJNA1112809 | 90984 | 351 | 2.884892 | 10.12597092 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 440 | 6.059999999999999e-119 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g87709 | i0 | 89.429 | 281.621082621083 | 350 | 36 | 99 | 1 | 2 | 351 | 502 | 850 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 98849 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 5322633 | 5322633 | PRJNA1112809_P_NODE_165545_length_250_cov_11.209040_g162270_i0 | PRJNA1112809 | 165545 | 250 | 11.20904 | 28.0226 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 267 | 7.43e-67 | NTclustered | gi|164510704|emb|AJ966883.1| | 48466 | g162270 | i0 | 86.179 | 257.724 | 246 | 34 | 98 | 0 | 1 | 246 | 4614 | 4859 | Prosthecobacter vanneervenii 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 12252 | blastn | 64431 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 6598399 | 6598399 | PRJNA1112809_P_NODE_197066_length_233_cov_3.168750_g193791_i0 | PRJNA1112809 | 197066 | 233 | 3.16875 | 7.3831875 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 331 | 2.39e-86 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g193791 | i0 | 92.275 | 103.618025751073 | 233 | 18 | 100 | 0 | 1 | 233 | 5153779 | 5154011 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 24143 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7871531 | 7871531 | PRJNA1112809_P_NODE_10787_length_1981_cov_2.472746_g9183_i0 | PRJNA1112809 | 10787 | 1981 | 2.472746 | 48.98509826 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 1339 | 0 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g9183 | i0 | 84.846 | 58.907117617365 | 1333 | 198 | 67 | 4 | 642 | 1972 | 5312639 | 5313969 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 116695 | 1339 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 7872054 | 7872054 | PRJNA1112809_P_NODE_13547_length_1675_cov_5.739076_g11609_i0 | PRJNA1112809 | 13547 | 1675 | 5.739076 | 96.129523 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 2706 | 0 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g11609 | i0 | 95.823 | 92.4250746268657 | 1676 | 69 | 100 | 1 | 1 | 1675 | 5153984 | 5152309 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 154812 | 2706 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7872248 | 7872248 | PRJNA1112809_P_NODE_145247_length_268_cov_1.579487_g141972_i0 | PRJNA1112809 | 145247 | 268 | 1.579487 | 4.23302516 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 182 | 3e-41 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g141972 | i0 | 80 | 2.79477611940298 | 245 | 49 | 91 | 0 | 1 | 245 | 146501 | 146745 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 749 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 8676405 | 8676405 | PRJNA1112809_P_NODE_12047_length_1834_cov_6.134583_g10279_i0 | PRJNA1112809 | 12047 | 1834 | 6.134583 | 112.50825222 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 1435 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g10279 | i0 | 81.281 | 259.196292257361 | 1843 | 283 | 99 | 48 | 1 | 1825 | 1898 | 100 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 475366 | 1435 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 10422697 | 10422697 | PRJNA1112809_P_NODE_133569_length_280_cov_2.231884_g130294_i0 | PRJNA1112809 | 133569 | 280 | 2.231884 | 6.2492752 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 91.6 | 5.47e-14 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g130294 | i0 | 92.308 | 0.232142857142857 | 65 | 4 | 23 | 1 | 144 | 208 | 5255214 | 5255151 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 65 | 91.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 11697365 | 11697365 | PRJNA1112809_P_NODE_103530_length_324_cov_1.756972_g100255_i0 | PRJNA1112809 | 103530 | 324 | 1.756972 | 5.69258928 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 433 | 9.299999999999999e-117 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g100255 | i0 | 91.022 | 196.854938271605 | 323 | 25 | 98 | 4 | 6 | 324 | 1315318 | 1315640 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 63781 | 433 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11698406 | 11698406 | PRJNA1112809_P_NODE_159650_length_254_cov_2.906077_g156375_i0 | PRJNA1112809 | 159650 | 254 | 2.906077 | 7.38143558 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 392 | 1.1999999999999999e-104 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g156375 | i0 | 94.488 | 147.716535433071 | 254 | 14 | 100 | 0 | 1 | 254 | 2398 | 2145 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 37520 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 12972572 | 12972572 | PRJNA1112809_P_NODE_109111_length_314_cov_1.522822_g105836_i0 | PRJNA1112809 | 109111 | 314 | 1.522822 | 4.78166108 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 185 | 2.7799999999999993e-42 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g105836 | i0 | 83.938 | 1.19426751592357 | 193 | 31 | 61 | 0 | 36 | 228 | 4509482 | 4509290 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 375 | 185 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 14249569 | 14249569 | PRJNA1112809_P_NODE_35412_length_717_cov_4.768634_g32257_i0 | PRJNA1112809 | 35412 | 717 | 4.768634 | 34.19110578 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 429 | 2.84e-115 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g32257 | i0 | 85.888 | 4.00976290097629 | 411 | 49 | 57 | 4 | 1 | 411 | 3216275 | 3215874 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 2875 | 429 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 15522012 | 15522012 | PRJNA1112809_P_NODE_142593_length_271_cov_1.186869_g139318_i0 | PRJNA1112809 | 142593 | 271 | 1.186869 | 3.21641499 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 379 | 1e-100 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g139318 | i0 | 91.971 | 72.4723247232472 | 274 | 16 | 100 | 4 | 1 | 271 | 1316246 | 1315976 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 19640 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15522633 | 15522633 | PRJNA1112809_P_NODE_179773_length_245_cov_3.372093_g176498_i0 | PRJNA1112809 | 179773 | 245 | 3.372093 | 8.26162785 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 331 | 2.5400000000000002e-86 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g176498 | i0 | 91.02 | 163.436734693878 | 245 | 22 | 100 | 0 | 1 | 245 | 3832520 | 3832764 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 40042 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16795704 | 16795704 | PRJNA1112809_P_NODE_102794_length_325_cov_2.821429_g99519_i0 | PRJNA1112809 | 102794 | 325 | 2.821429 | 9.16964425 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 337 | 7.53e-88 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g99519 | i0 | 87.671 | 307.335384615385 | 292 | 32 | 91 | 4 | 11 | 301 | 3450468 | 3450180 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 99884 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 16796227 | 16796227 | PRJNA1112809_P_NODE_128554_length_286_cov_1.446009_g125279_i0 | PRJNA1112809 | 128554 | 286 | 1.446009 | 4.13558574 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 416 | 8.139999999999999e-112 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g125279 | i0 | 93.841 | 219.814685314685 | 276 | 17 | 97 | 0 | 11 | 286 | 2833437 | 2833162 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 62867 | 416 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 16796918 | 16796918 | PRJNA1112809_P_NODE_16794_length_1406_cov_5.300825_g11609_i1 | PRJNA1112809 | 16794 | 1406 | 5.300825 | 74.5295995 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 2180 | 0 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g11609 | i1 | 94.729 | 103.040540540541 | 1404 | 71 | 99 | 3 | 1 | 1403 | 5152309 | 5153710 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 144875 | 2180 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20622093 | 20622093 | PRJNA1112809_P_NODE_53097_length_517_cov_1.905405_g49830_i0 | PRJNA1112809 | 53097 | 517 | 1.905405 | 9.85094385 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 165 | 6.23e-36 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g49830 | i0 | 75.749 | 16.4738878143133 | 367 | 68 | 69 | 19 | 4 | 359 | 518250 | 517894 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 8517 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21425459 | 21425459 | PRJNA1112809_P_NODE_200817_length_213_cov_4.378571_g197542_i0 | PRJNA1112809 | 200817 | 213 | 4.378571 | 9.32635623 | Opitutaceae | 134623 | Bacteria | Bacteria | 311 | 2.8000000000000003e-80 | NTclustered | gi|2452067159|gb|CP119075.1| | 2909285 | g197542 | i0 | 92.958 | 25.1784037558685 | 213 | 15 | 100 | 0 | 1 | 213 | 536201 | 535989 | Synoicihabitans lomoniglobus strain LMO-M01 chromosome, complete genome | blastn | 5363 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Synoicihabitans | Synoicihabitans lomoniglobus | |
| 21895992 | 21895992 | PRJNA1112809_P_NODE_134578_length_279_cov_2.131068_g131303_i0 | PRJNA1112809 | 134578 | 279 | 2.131068 | 5.94567972 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 315 | 2.97e-81 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g131303 | i0 | 87.143 | 137.4229390681 | 280 | 32 | 100 | 4 | 1 | 279 | 24 | 300 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 38341 | 315 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 21896052 | 21896052 | PRJNA1112809_P_NODE_137118_length_276_cov_3.453202_g133843_i0 | PRJNA1112809 | 137118 | 276 | 3.453202 | 9.53083752 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 89.8 | 1.93e-13 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g133843 | i0 | 83.333 | 1.2536231884058 | 102 | 11 | 36 | 4 | 6 | 104 | 261361 | 261263 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 346 | 89.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 21896573 | 21896573 | PRJNA1112809_P_NODE_161618_length_253_cov_1.166667_g158343_i0 | PRJNA1112809 | 161618 | 253 | 1.166667 | 2.95166751 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g158343 | i0 | 96.875 | 0.126482213438735 | 32 | 1 | 13 | 0 | 5 | 36 | 2068645 | 2068614 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 32 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 23975987 | 23975987 | PRJNA1112809_P_NODE_90779_length_352_cov_1.655914_g87504_i0 | PRJNA1112809 | 90779 | 352 | 1.655914 | 5.82881728 | Prosthecobacter | 48463 | Bacteria | Bacteria | 555 | 2.0799999999999995e-153 | NTclustered | gi|2116728087|gb|OK513264.1| | 48465 | g87504 | i0 | 94.766 | 103.071022727273 | 363 | 8 | 100 | 4 | 1 | 352 | 500 | 138 | Prosthecobacter dejongeii strain CG69 16S ribosomal RNA gene, partial sequence | blastn | 36281 | 560 | 0.991071428571429 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;