RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1112809" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1112809 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7872906 7872906 PRJNA1112809_P_NODE_183167_length_244_cov_1.783626_g179892_i0 PRJNA1112809 183167 244 1.783626 4.35204744 Rhynchopus euleeides 630703 Euglenozoa other_Eukaryota 187 5.7799999999999984e-43   NTclustered gi|329668900|gb|JF698664.1| 630703 g179892 i0 97.273 0.450819672131148 110 3 45 0 2 111 1 110 Rhynchopus euleeides strain ATCC50226 chromosome re5226, partial sequence blastn 110 187 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Rhynchopus Rhynchopus euleeides
20620306 20620306 PRJNA1112809_P_NODE_135057_length_279_cov_1.271845_g131782_i0 PRJNA1112809 135057 279 1.271845 3.54844755 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 183 8.73e-42   NTclustered gi|1002452927|ref|XM_015800798.1| 157538 g131782 i0 79.078 9.72043010752688 282 47 99 9 2 277 768 493 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 2712 183 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;