RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1112809" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1112809 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6599643 6599643 PRJNA1112809_P_NODE_82146_length_376_cov_1.669967_g78871_i0 PRJNA1112809 82146 376 1.669967 6.27907592 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 422 2.37e-113   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g78871 i0 87.903 55.1595744680851 372 27 99 12 6 376 1243 889 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 20740 422 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
21897687 21897687 PRJNA1112809_P_NODE_45618_length_581_cov_90.838583_g42377_i0 PRJNA1112809 45618 581 90.838583 527.77216723 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 584 4.579999999999998e-162   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g42377 i0 85.025 64.3373493975904 601 61 100 23 1 581 15 606 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 37380 584 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;