RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1112809" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1112809 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4047192 4047192 PRJNA1112809_P_NODE_198004_length_231_cov_2.468354_g194729_i0 PRJNA1112809 198004 231 2.468354 5.70189774 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 267 6.769999999999999e-67   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g194729 i0 89.202 100.484848484848 213 23 92 0 19 231 1478225 1478437 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 23212 267 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
7871749 7871749 PRJNA1112809_P_NODE_119727_length_297_cov_2.294643_g116452_i0 PRJNA1112809 119727 297 2.294643 6.81508971 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 134 9.58e-27   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g116452 i0 96.296 48.6767676767677 81 3 27 0 155 235 2664925 2665005 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 14457 134 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
16796360 16796360 PRJNA1112809_P_NODE_136014_length_278_cov_1.170732_g132739_i0 PRJNA1112809 136014 278 1.170732 3.25463496 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 124 5.35e-24   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g132739 i0 89.691 0.348920863309353 97 10 35 0 1 97 4224826 4224730 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 97 124 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;