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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1112809" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 10 ✖

bioproject 1

  • PRJNA1112809 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1023223 1023223 PRJNA1112809_P_NODE_158501_length_256_cov_0.841530_g155226_i0 PRJNA1112809 158501 256 0.84153 2.1543168 Haematococcus 44744 Plants Plants 468 1.95e-127   NTclustered gi|1341122420|gb|MG022682.1| 44745 g155226 i0 99.609 100.01953125 256 1 100 0 1 256 766 511 Haematococcus lacustris isolate CCAP 34/1F small subunit ribosomal RNA gene, partial sequence blastn 25605 468 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
1494956 1494956 PRJNA1112809_P_NODE_195962_length_236_cov_2.558282_g192687_i0 PRJNA1112809 195962 236 2.558282 6.03754552 Chlamydomonas peterfii 28462 Plants Plants 403 5.07e-108   NTclustered gi|952953330|gb|KT624938.1| 28462 g192687 i0 97.458 153.46186440678 236 6 100 0 1 236 1811 2046 Chlamydomonas peterfii clone contig00007 chloroplast, partial genome blastn 36217 403 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas peterfii
2298588 2298588 PRJNA1112809_P_NODE_129322_length_285_cov_1.726415_g126047_i0 PRJNA1112809 129322 285 1.726415 4.92028275 Trebouxia 13786 Plants Plants 527 3.59e-145   NTclustered gi|49781197|gb|AY648107.1| 283661 g126047 i0 100 99.8175438596491 285 0 100 0 1 285 324 40 Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence blastn 28448 527 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. Wei 22-c
14248420 14248420 PRJNA1112809_P_NODE_150432_length_263_cov_1.542105_g147157_i0 PRJNA1112809 150432 263 1.542105 4.05573615 Haematococcus lacustris 44745 Plants Plants 403 5.75e-108   NTclustered gi|2201040776|gb|MN709220.1| 44745 g147157 i0 94.074 146.368821292776 270 9 100 3 1 263 638869 638600 Haematococcus lacustris strain FACHB-712 chloroplast, complete genome blastn 38495 403 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
16796389 16796389 PRJNA1112809_P_NODE_137554_length_276_cov_1.517241_g134279_i0 PRJNA1112809 137554 276 1.517241 4.18758516 Chloroidium ellipsoideum 63676 Plants Plants 298 2.95e-76   NTclustered gi|1169296931|gb|KY364701.1| 63676 g134279 i0 86.545 14.9855072463768 275 32 99 5 1 273 5419 5690 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 4136 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
16798708 16798708 PRJNA1112809_P_NODE_85174_length_367_cov_1.479592_g81899_i0 PRJNA1112809 85174 367 1.479592 5.43010264 Chloroidium sp. KL-2023a 3031248 Plants Plants 628 1.2699999999999998e-175   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g81899 i0 97.548 108.891008174387 367 9 100 0 1 367 220550 220916 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 39963 628 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
18070644 18070644 PRJNA1112809_P_NODE_125075_length_290_cov_1.465438_g121800_i0 PRJNA1112809 125075 290 1.465438 4.2497702 Chloroidium sp. KL-2023a 3031248 Plants Plants 503 6.17e-138   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g121800 i0 97.931 106.744827586207 290 6 100 0 1 290 2051 1762 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 30956 503 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
18874894 18874894 PRJNA1112809_P_NODE_142315_length_271_cov_1.555556_g139040_i0 PRJNA1112809 142315 271 1.555556 4.21555676 Viridiplantae 33090 Plants Plants 339 1.7e-88   NTclustered gi|2082253475|ref|XM_001695212.2| 3055 g139040 i0 89.85 98.5719557195572 266 23 97 3 8 271 1413 1150 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA blastn 26713 340 0.997058823529412 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23173423 23173423 PRJNA1112809_P_NODE_62779_length_455_cov_2.408377_g59506_i0 PRJNA1112809 62779 455 2.408377 10.95811535 Chlamydomonas chlamydogama 225041 Plants Plants 673 0   NTclustered gi|66864258|gb|DQ015713.1| 225041 g59506 i0 95.082 94.1054945054945 427 21 94 0 23 449 1855 1429 Chlamydomonas chlamydogama strain UTEX 102 26S ribosomal RNA gene, partial sequence blastn 42818 673 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas chlamydogama
24447531 24447531 PRJNA1112809_P_NODE_76100_length_396_cov_2.167183_g72825_i0 PRJNA1112809 76100 396 2.167183 8.58204468 Haematococcus lacustris 44745 Plants Plants 534 3.089999999999999e-147   NTclustered gi|2201040776|gb|MN709220.1| 44745 g72825 i0 90.998 121.068181818182 411 15 100 10 1 396 8351 7948 Haematococcus lacustris strain FACHB-712 chloroplast, complete genome blastn 47943 534 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;