RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1111448" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 6 ✖

bioproject 1

  • PRJNA1111448 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6596633 6596633 PRJNA1111448_S_NODE_96406_length_276_cov_0.758621_g95583_i0 PRJNA1111448 96406 276 0.758621 2.09379396 Salmonella phage Salmp-p7 3344723 Viruses Viruses 62.1 4.22e-5   NTclustered gi|2806890669|gb|PQ189589.1| 3344723 g95583 i0 100 0.119565217391304 33 0 12 0 9 41 60051 60019 Salmonella phage Salmp-p7, complete genome blastn 33 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Casjensviridae Chivirus Salmonella phage Salmp-p7
7871017 7871017 PRJNA1111448_S_NODE_63827_length_321_cov_0.931452_g63004_i0 PRJNA1111448 63827 321 0.931452 2.98996092 Caudoviricetes sp. 2832643 Viruses Viruses 69.4 2.99e-7   NTclustered gi|2914818327|gb|OR222051.1| 2832643 g63004 i0 100 12.6573208722741 37 0 12 0 14 50 15 51 MAG: Caudoviricetes sp. isolate MSP0064 genomic sequence blastn 4063 69.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10421606 10421606 PRJNA1111448_S_NODE_56169_length_335_cov_1.175573_g55346_i0 PRJNA1111448 56169 335 1.175573 3.93816955 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.032   NTclustered gi|2059564958|tpg|BK036394.1| 2832643 g55346 i0 100 0.0835820895522388 28 0 8 0 70 97 40191 40164 MAG TPA_asm: Caudoviricetes sp. isolate ct7fR1, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10421739 10421739 PRJNA1111448_S_NODE_69809_length_311_cov_0.970588_g68986_i0 PRJNA1111448 69809 311 0.970588 3.01852868 Caudoviricetes sp. 2832643 Viruses Viruses 58.4 6.25e-4   NTclustered gi|2054675504|tpg|BK052493.1| 2832643 g68986 i0 100 3.09967845659164 31 0 10 0 1 31 12969 12939 MAG TPA_asm: Caudoviricetes sp. isolate ctLb07, partial genome blastn 964 58.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24443668 24443668 PRJNA1111448_S_NODE_137700_length_242_cov_0.893491_g136877_i0 PRJNA1111448 137700 242 0.893491 2.16224822 Caudoviricetes sp. 2832643 Viruses Viruses 65.8 2.8e-6   NTclustered gi|2914835947|gb|OR222690.1| 2832643 g136877 i0 100 16.4380165289256 35 0 14 0 1 35 5 39 MAG: Caudoviricetes sp. isolate MSP0243 genomic sequence blastn 3978 65.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24443944 24443944 PRJNA1111448_S_NODE_36340_length_386_cov_0.984026_g35517_i0 PRJNA1111448 36340 386 0.984026 3.79834036 Enterococcus phage SSMH01 3075855 Viruses Viruses 71.3 1.02e-7   NTclustered gi|2583824285|gb|OR360270.1| 3075855 g35517 i0 95.455 10.4430051813472 44 2 11 0 3 46 41636 41593 Enterococcus phage SSMH01, complete genome blastn 4031 71.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Efquatrovirus Enterococcus phage SSMH01

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;