contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA1111448" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1492779 | 1492779 | PRJNA1111448_S_NODE_59082_length_329_cov_2.570312_g58259_i0 | PRJNA1111448 | 59082 | 329 | 2.570312 | 8.45632648 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 407 | 5.74e-109 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g58259 | i0 | 92.933 | 74.1063829787234 | 283 | 14 | 85 | 6 | 1 | 280 | 3832670 | 3832391 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 24381 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2768330 | 2768330 | PRJNA1111448_S_NODE_15243_length_510_cov_4.480549_g14434_i0 | PRJNA1111448 | 15243 | 510 | 4.480549 | 22.8507999 | Coraliomargarita sp. | 2024828 | Bacteria | Bacteria | 942 | 0 | NTclustered | gi|1275509842|gb|MG438537.1| | 2024828 | g14434 | i0 | 100 | 92.856862745098 | 510 | 0 | 100 | 0 | 1 | 510 | 902 | 393 | Coraliomargarita sp. strain BN_1951 16S ribosomal RNA gene, partial sequence | blastn | 47357 | 942 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita sp. | |
| 4044669 | 4044669 | PRJNA1111448_S_NODE_25284_length_432_cov_5.005571_g24461_i0 | PRJNA1111448 | 25284 | 432 | 5.005571 | 21.62406672 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|2442650069|gb|OQ422736.1| | 156588 | g24461 | i0 | 96.991 | 98.3541666666667 | 432 | 13 | 100 | 0 | 1 | 432 | 826 | 395 | Uncultured Verrucomicrobia bacterium clone KCM_4_1_112 16S ribosomal RNA gene, partial sequence | blastn | 42489 | 726 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 5320592 | 5320592 | PRJNA1111448_S_NODE_24125_length_439_cov_3.595628_g23303_i0 | PRJNA1111448 | 24125 | 439 | 3.595628 | 15.78480692 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 351 | 3.74e-92 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g23303 | i0 | 82.311 | 45.8542141230068 | 424 | 57 | 95 | 16 | 23 | 437 | 1291 | 1705 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 20130 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 6595917 | 6595917 | PRJNA1111448_S_NODE_26426_length_426_cov_3.983003_g25603_i0 | PRJNA1111448 | 26426 | 426 | 3.983003 | 16.96759278 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 318 | 3.67e-82 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g25603 | i0 | 89.453 | 147.544600938967 | 256 | 21 | 59 | 5 | 1 | 252 | 1316761 | 1316508 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 62854 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6596284 | 6596284 | PRJNA1111448_S_NODE_63206_length_322_cov_1.156627_g62383_i0 | PRJNA1111448 | 63206 | 322 | 1.156627 | 3.72433894 | Luteolibacter sp. LG18 | 2819286 | Bacteria | Bacteria | 538 | 1.9e-148 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g62383 | i0 | 96.904 | 277.801242236025 | 323 | 7 | 100 | 3 | 1 | 322 | 2217711 | 2217391 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 89452 | 538 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 | |
| 9145923 | 9145923 | PRJNA1111448_S_NODE_68408_length_313_cov_1.604167_g67585_i0 | PRJNA1111448 | 68408 | 313 | 1.604167 | 5.02104271 | Planctomycetes bacterium syqfu | 2896527 | Bacteria | Bacteria | 327 | 4.339999999999999e-85 | NTclustered | gi|2155219436|gb|CP087563.1| | 2896527 | g67585 | i0 | 85.804 | 76.8242811501597 | 317 | 35 | 100 | 10 | 1 | 313 | 5331450 | 5331760 | Planctomycetes bacterium syqfu chromosome, complete genome | blastn | 24046 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium syqfu | |||||
| 9146238 | 9146238 | PRJNA1111448_S_NODE_98008_length_274_cov_1.134328_g97185_i0 | PRJNA1111448 | 98008 | 274 | 1.134328 | 3.10805872 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 451 | 2.12e-122 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g97185 | i0 | 96.35 | 72.9343065693431 | 274 | 10 | 100 | 0 | 1 | 274 | 3804950 | 3804677 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 19984 | 451 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 9951154 | 9951154 | PRJNA1111448_S_NODE_8488_length_620_cov_1.524680_g7728_i0 | PRJNA1111448 | 8488 | 620 | 1.52468 | 9.453016 | Cerasicoccaceae | 3056374 | Bacteria | Bacteria | 466 | 1.85e-126 | NTclustered | gi|2080888260|gb|CP080649.1| | 2866311 | g7728 | i0 | 80.542 | 149.422580645161 | 627 | 104 | 100 | 17 | 1 | 620 | 381747 | 381132 | Ruficoccus sp. ZRK36 chromosome, complete genome | blastn | 92642 | 466 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | Ruficoccus sp. ZRK36 | |
| 14246617 | 14246617 | PRJNA1111448_S_NODE_142672_length_229_cov_2.314103_g141849_i0 | PRJNA1111448 | 142672 | 229 | 2.314103 | 5.29929587 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 285 | 1.85e-72 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g141849 | i0 | 89.083 | 140.668122270742 | 229 | 25 | 100 | 0 | 1 | 229 | 1010193 | 1009965 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 32213 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 15520477 | 15520477 | PRJNA1111448_S_NODE_25473_length_431_cov_4.122905_g24650_i0 | PRJNA1111448 | 25473 | 431 | 4.122905 | 17.76972055 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 466 | 1.25e-126 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g24650 | i0 | 86.456 | 58.7772621809745 | 443 | 39 | 100 | 18 | 1 | 431 | 1316666 | 1316233 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 25333 | 466 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16794805 | 16794805 | PRJNA1111448_S_NODE_143434_length_226_cov_2.013072_g142611_i0 | PRJNA1111448 | 143434 | 226 | 2.013072 | 4.54954272 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 311 | 3.01e-80 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g142611 | i0 | 91.556 | 156.663716814159 | 225 | 19 | 99 | 0 | 1 | 225 | 2002078 | 2001854 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 35406 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 16795258 | 16795258 | PRJNA1111448_S_NODE_61494_length_325_cov_1.242063_g60671_i0 | PRJNA1111448 | 61494 | 325 | 1.242063 | 4.03670475 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 462 | 1.19e-125 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g60671 | i0 | 92.378 | 77.3230769230769 | 328 | 20 | 100 | 5 | 1 | 325 | 5153006 | 5153331 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 25130 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20618854 | 20618854 | PRJNA1111448_S_NODE_15877_length_503_cov_1.879070_g15066_i0 | PRJNA1111448 | 15877 | 503 | 1.87907 | 9.4517221 | Ruficoccus sp. ZRK36 | 2866311 | Bacteria | Bacteria | 444 | 6.94e-120 | NTclustered | gi|2080888260|gb|CP080649.1| | 2866311 | g15066 | i0 | 83.333 | 160.290258449304 | 492 | 70 | 97 | 12 | 10 | 495 | 381973 | 382458 | Ruficoccus sp. ZRK36 chromosome, complete genome | blastn | 80626 | 444 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | Ruficoccus sp. ZRK36 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;