RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1111146" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111146 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15519488 15519488 PRJNA1111146_P_NODE_415193_length_178_cov_0.912000_g414055_i0 PRJNA1111146 415193 178 0.912 1.62336 Mucor mucedo 29922 Fungi Fungi 287 3.79e-73   NTclustered gi|2324060483|ref|XM_051602330.1| 29922 g414055 i0 96.023 1.74157303370787 176 7 99 0 1 176 1773 1598 Mucor mucedo uncharacterized protein (EV154DRAFT_516024), mRNA blastn 310 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
16793331 16793331 PRJNA1111146_P_NODE_271634_length_192_cov_1.604317_g270496_i0 PRJNA1111146 271634 192 1.604317 3.08028864 Gilbertella persicaria 101096 Fungi Fungi 108 3.48e-19   NTclustered gi|2323720394|ref|XM_051576548.1| 101096 g270496 i0 92.105 1.51041666666667 76 6 40 0 21 96 72 147 Gilbertella persicaria ras-like protein 3 (B0P05DRAFT_527459), mRNA blastn 290 108 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
17599625 17599625 PRJNA1111146_P_NODE_344434_length_182_cov_3.348837_g343296_i0 PRJNA1111146 344434 182 3.348837 6.09488334 Fungi 4751 Fungi Fungi 287 3.9e-73   NTclustered gi|658131632|emb|HF968958.1| 4874 g343296 i0 95.055 28.2142857142857 182 9 100 0 1 182 2182 2001 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 5135 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;