RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1111146" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111146 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7868788 7868788 PRJNA1111146_P_NODE_231807_length_200_cov_1.251701_g230669_i0 PRJNA1111146 231807 200 1.251701 2.503402 Anaerolineales bacterium 2073117 Bacteria Bacteria 265 2.0499999999999997e-66   NTclustered gi|2556903179|gb|CP129482.1| 2073117 g230669 i0 92.105 8.25 190 12 95 3 1 189 3065491 3065678 MAG: Anaerolineales bacterium isolate cMAG.14 chromosome, complete genome blastn 1650 265 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
9143497 9143497 PRJNA1111146_P_NODE_192248_length_208_cov_1.103226_g191110_i0 PRJNA1111146 192248 208 1.103226 2.29471008 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 150 6.28e-32   NTclustered gi|2874253882|emb|OY969938.1| 1672391 g191110 i0 81.183 13.3942307692308 186 35 89 0 18 203 1977772 1977957 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.c.1 genome assembly, chromosome: 1 blastn 2786 150 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
9144329 9144329 PRJNA1111146_P_NODE_377288_length_180_cov_1.795276_g376150_i0 PRJNA1111146 377288 180 1.795276 3.2314968 Thermoflexus hugenholtzii 1495650 Bacteria Bacteria 279 6.43e-71   NTclustered gi|2049907263|gb|CP076326.1| 1495650 g376150 i0 94.944 11.6111111111111 178 9 99 0 1 178 123591 123414 MAG: Thermoflexus hugenholtzii isolate RBS10-4 chromosome, complete genome blastn 2090 279 1 Bacteria   Bacillati Chloroflexota Thermoflexia Thermoflexales Thermoflexaceae Thermoflexus Thermoflexus hugenholtzii
11695226 11695226 PRJNA1111146_P_NODE_345870_length_182_cov_1.767442_g344732_i0 PRJNA1111146 345870 182 1.767442 3.21674444 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 204 4.04e-48   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g344732 i0 86.885 89.3846153846154 183 23 100 1 1 182 1733824 1733642 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 16268 204 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
14245715 14245715 PRJNA1111146_P_NODE_407252_length_179_cov_0.880952_g406114_i0 PRJNA1111146 407252 179 0.880952 1.57690408 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 204 3.959999999999999e-48   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g406114 i0 87.293 77.8826815642458 181 19 100 4 1 179 3466743 3466921 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 13941 204 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
16793544 16793544 PRJNA1111146_P_NODE_323594_length_184_cov_0.870229_g322456_i0 PRJNA1111146 323594 184 0.870229 1.60122136 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 307 3.0300000000000004e-79   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g322456 i0 96.739 357.179347826087 184 6 100 0 1 184 1858688 1858505 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 65721 307 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
20617466 20617466 PRJNA1111146_P_NODE_313237_length_185_cov_0.863636_g312099_i0 PRJNA1111146 313237 185 0.863636 1.5977266 Herpetosiphon aurantiacus 65 Bacteria Bacteria 313 6.56e-81   NTclustered gi|159889572|gb|CP000875.1| 316274 g312099 i0 97.283 0.994594594594595 184 5 99 0 1 184 5646154 5645971 Herpetosiphon aurantiacus DSM 785, complete genome blastn 184 313 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
23168205 23168205 PRJNA1111146_P_NODE_201979_length_206_cov_1.222222_g200841_i0 PRJNA1111146 201979 206 1.222222 2.51777732 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 206 1.3099999999999999e-48   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g200841 i0 84.834 286.781553398058 211 25 100 6 1 206 3521712 3521504 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 59077 206 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;