RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1111146" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1111146 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
215528 215528 PRJNA1111146_P_NODE_117681_length_234_cov_2.193370_g116543_i0 PRJNA1111146 117681 234 2.19337 5.1324858 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 344 3.09e-90   NTclustered gi|238617605|gb|FJ973380.1| 45107 g116543 i0 93.191 66.1111111111111 235 14 100 2 1 234 2379 2146 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15470 344 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
1490213 1490213 PRJNA1111146_P_NODE_104882_length_240_cov_8.342246_g103744_i0 PRJNA1111146 104882 240 8.342246 20.0213904 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 322 1.49e-83   NTclustered gi|238617605|gb|FJ973380.1| 45107 g103744 i0 90.909 43.05 242 19 100 3 1 240 1875 1635 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 10332 322 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
2766231 2766231 PRJNA1111146_P_NODE_114223_length_236_cov_1.475410_g113085_i0 PRJNA1111146 114223 236 1.47541 3.4819676 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 75 4.52e-9   NTclustered gi|88792583|gb|DQ386164.1| 372086 g113085 i0 84.615 15.9364406779661 78 9 33 3 77 154 1751 1825 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 3761 75 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9143814 9143814 PRJNA1111146_P_NODE_269108_length_192_cov_4.366906_g267970_i0 PRJNA1111146 269108 192 4.366906 8.38445952 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 322 1.14e-83   NTclustered gi|238617605|gb|FJ973380.1| 45107 g267970 i0 96.875 100.473958333333 192 6 100 0 1 192 1415 1606 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 19291 322 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12500675 12500675 PRJNA1111146_P_NODE_285530_length_189_cov_2.257353_g284392_i0 PRJNA1111146 285530 189 2.257353 4.26639717 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 350 5.14e-92   NTclustered gi|1695785|gb|U42447.1|HGU42447 45107 g284392 i0 100 99.989417989418 189 0 100 0 1 189 1458 1646 Heteromita globosa 18S ribosomal RNA gene, complete sequence blastn 18898 350 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
15518885 15518885 PRJNA1111146_P_NODE_290553_length_188_cov_3.762963_g289415_i0 PRJNA1111146 290553 188 3.762963 7.07437044 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 348 1.84e-91   NTclustered gi|68271541|gb|DQ086722.1| 45107 g289415 i0 100 100.744680851064 188 0 100 0 1 188 532 345 Heteromita globosa isolate HETEGLOB large subunit ribosomal RNA gene, partial sequence blastn 18940 348 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
19341419 19341419 PRJNA1111146_P_NODE_105276_length_240_cov_1.802139_g104138_i0 PRJNA1111146 105276 240 1.802139 4.3251336 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 289 1.51e-73   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g104138 i0 96.552 72.6875 174 6 73 0 67 240 3838 3665 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17445 289 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24442947 24442947 PRJNA1111146_P_NODE_443460_length_173_cov_3.108333_g442322_i0 PRJNA1111146 443460 173 3.108333 5.37741609 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 298 1.69e-76   NTclustered gi|238617605|gb|FJ973380.1| 45107 g442322 i0 97.688 98.3699421965318 173 4 100 0 1 173 1395 1223 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17018 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;