RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1111082" and tax_phylum = "Uroviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111082 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1021231 1021231 PRJNA1111082_P_NODE_7561_length_294_cov_1.140271_g7516_i0 PRJNA1111082 7561 294 1.140271 3.35239674 root 1 Root_unresolved Root_unresolved 516 8.05e-142   NTclustered gi|1269168330|gb|MF975720.1| 2041487 g7516 i0 98.299 19.7210884353741 294 5 100 0 1 294 35976 36269 Pseudomonas phage VW-6S, complete genome blastn 5798 521 0.990403071017274 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Pseudomonas phage VW-6S
4042063 4042063 PRJNA1111082_P_NODE_12284_length_244_cov_0.883041_g12239_i0 PRJNA1111082 12284 244 0.883041 2.15462004 Caudoviricetes sp. 2832643 Viruses Viruses 363 8.949999999999999e-96   NTclustered gi|2914944268|gb|OR221794.1| 2832643 g12239 i0 93.443 4.01639344262295 244 16 100 0 1 244 38154 37911 MAG: Caudoviricetes sp. isolate MSP1228 genomic sequence blastn 980 363 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12969124 12969124 PRJNA1111082_P_NODE_12631_length_242_cov_0.923077_g12586_i0 PRJNA1111082 12631 242 0.923077 2.23384634 Maltschvirus maltsch 2956182 Viruses Viruses 252 2e-62   NTclustered gi|1839160814|emb|LR796474.1| 2100421 g12586 i0 85.477 8.41735537190083 241 35 99 0 1 241 22969 23209 uncultured Caudovirales phage genome assembly blastn 2037 252 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
16792492 16792492 PRJNA1111082_P_NODE_3714_length_401_cov_2.106707_g3669_i0 PRJNA1111082 3714 401 2.106707 8.44789507 Maltschvirus maltsch 2956182 Viruses Viruses 337 9.47e-88   NTclustered gi|1839221816|emb|LR797096.1| 2100421 g3669 i0 81.955 9.79052369077307 399 70 99 2 1 398 16727 17124 uncultured Caudovirales phage genome assembly blastn 3926 337 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
18066871 18066871 PRJNA1111082_P_NODE_10935_length_250_cov_1.005650_g10890_i0 PRJNA1111082 10935 250 1.00565 2.514125 Schitoviridae sp. 2853078 Viruses Viruses 318 2.02e-82   NTclustered gi|2906149853|gb|PQ646487.1| 2853078 g10890 i0 90.756 0.952 238 22 95 0 10 247 2269 2506 MAG: Schitoviridae sp. isolate k127_4219765 genomic sequence blastn 238 318 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae   Schitoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;