RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1111082" and tax_kingdom = "Sangervirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Sangervirae · 3 ✖

bioproject 1

  • PRJNA1111082 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4042046 4042046 PRJNA1111082_P_NODE_11464_length_247_cov_1.793103_g11419_i0 PRJNA1111082 11464 247 1.793103 4.42896441 Microviridae sp. 2202644 Viruses Viruses 279 9.41e-71   NTclustered gi|2302008585|gb|MT202080.1| 2202644 g11419 i0 87.045 1 247 32 100 0 1 247 345 591 MAG: Microviridae sp. isolate CN7_L15_1172, complete genome blastn 247 279 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
7868211 7868211 PRJNA1111082_P_NODE_8127_length_284_cov_1.492891_g8082_i0 PRJNA1111082 8127 284 1.492891 4.23981044 Microviridae sp. 2202644 Viruses Viruses 165 3.23e-36   NTclustered gi|2906147918|gb|PQ646352.1| 2202644 g8082 i0 79.098 0.859154929577465 244 47 85 4 43 284 3207 3448 MAG: Microviridae sp. isolate k127_3487031 genomic sequence blastn 244 165 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
24441392 24441392 PRJNA1111082_P_NODE_8780_length_274_cov_1.776119_g8735_i0 PRJNA1111082 8780 274 1.776119 4.86656606 Gokushovirinae environmental samples 1478972 Viruses Viruses 122 1.8899999999999994e-23   NTclustered gi|599087640|gb|KF689346.1| 1478972 g8735 i0 79.444 3.18978102189781 180 31 65 5 11 187 411 235 Uncultured Gokushovirinae clone HRFSD07n4 major capsid protein gene, partial cds blastn 874 122 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Gokushovirinae environmental samples

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;