contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA1111082" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2765891 | 2765891 | PRJNA1111082_P_NODE_10383_length_253_cov_0.866667_g10338_i0 | PRJNA1111082 | 10383 | 253 | 0.866667 | 2.19266751 | Phocaeicola vulgatus | 821 | Bacteria | Bacteria | 388 | 1.5399999999999998e-103 | NTclustered | gi|2916523787|gb|CP181423.1| | 821 | g10338 | i0 | 94.466 | 138.699604743083 | 253 | 13 | 100 | 1 | 1 | 253 | 5017136 | 5017387 | Phocaeicola vulgatus strain sJLG0017 chromosome, complete genome | blastn | 35091 | 388 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola vulgatus | |
| 2765904 | 2765904 | PRJNA1111082_P_NODE_10823_length_251_cov_0.876404_g10778_i0 | PRJNA1111082 | 10823 | 251 | 0.876404 | 2.19977404 | Rufibacter sp. DG15C | 1379909 | Bacteria | Bacteria | 87.9 | 6.24e-13 | NTclustered | gi|1001988277|gb|CP010776.1| | 1379909 | g10778 | i0 | 73.643 | 1.02788844621514 | 258 | 54 | 100 | 11 | 1 | 251 | 854525 | 854275 | Rufibacter sp. DG15C, complete genome | blastn | 258 | 87.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Rufibacter | Rufibacter sp. DG15C | |
| 2765911 | 2765911 | PRJNA1111082_P_NODE_11103_length_249_cov_1.625000_g11058_i0 | PRJNA1111082 | 11103 | 249 | 1.625 | 4.04625 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 263 | 9.56e-66 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g11058 | i0 | 85.83 | 76.6947791164659 | 247 | 35 | 99 | 0 | 3 | 249 | 4458012 | 4458258 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 19097 | 263 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 4042058 | 4042058 | PRJNA1111082_P_NODE_12044_length_245_cov_0.906977_g11999_i0 | PRJNA1111082 | 12044 | 245 | 0.906977 | 2.22209365 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 261 | 3.38e-65 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g11999 | i0 | 87.179 | 1.9469387755102 | 234 | 24 | 95 | 5 | 12 | 243 | 98961 | 98732 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 477 | 261 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5318255 | 5318255 | PRJNA1111082_P_NODE_4545_length_368_cov_1.318644_g4500_i0 | PRJNA1111082 | 4545 | 368 | 1.318644 | 4.85260992 | Flavobacterium ammonificans | 1751056 | Bacteria | Bacteria | 586 | 7.75e-163 | NTclustered | gi|2119752067|dbj|AP025185.1| | 1751056 | g4500 | i0 | 95.393 | 16.508152173913 | 369 | 15 | 100 | 2 | 1 | 368 | 478771 | 478404 | Flavobacterium ammonificans SHINM13 DNA, complete genome | blastn | 6075 | 586 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammonificans | |
| 6593576 | 6593576 | PRJNA1111082_P_NODE_8746_length_275_cov_1.158416_g8701_i0 | PRJNA1111082 | 8746 | 275 | 1.158416 | 3.185644 | Runella sp. SP2 | 2268026 | Bacteria | Bacteria | 464 | 2.7399999999999998e-126 | NTclustered | gi|1509191025|gb|CP031030.1| | 2268026 | g8701 | i0 | 97.091 | 1 | 275 | 8 | 100 | 0 | 1 | 275 | 2228935 | 2229209 | Runella sp. SP2 chromosome, complete genome | blastn | 275 | 464 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Runella | Runella sp. SP2 | |
| 7868012 | 7868012 | PRJNA1111082_P_NODE_12427_length_243_cov_0.917647_g12382_i0 | PRJNA1111082 | 12427 | 243 | 0.917647 | 2.22988221 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 202 | 2.0599999999999995e-47 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g12382 | i0 | 82.7 | 0.975308641975309 | 237 | 32 | 98 | 7 | 3 | 239 | 1018823 | 1019050 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 237 | 202 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9142885 | 9142885 | PRJNA1111082_P_NODE_12028_length_245_cov_0.906977_g11983_i0 | PRJNA1111082 | 12028 | 245 | 0.906977 | 2.22209365 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 252 | 2.0299999999999998e-62 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g11983 | i0 | 86.463 | 2.57142857142857 | 229 | 31 | 93 | 0 | 17 | 245 | 3862120 | 3861892 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 630 | 252 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10418677 | 10418677 | PRJNA1111082_P_NODE_11009_length_250_cov_0.881356_g10964_i0 | PRJNA1111082 | 11009 | 250 | 0.881356 | 2.20339 | Flavobacterium limnophilum | 3003262 | Bacteria | Bacteria | 124 | 4.729999999999999e-24 | NTclustered | gi|2477668611|gb|CP114289.2| | 3003262 | g10964 | i0 | 89.109 | 0.404 | 101 | 10 | 40 | 1 | 1 | 100 | 224825 | 224725 | Flavobacterium limnophilum strain IMCC36791 chromosome, complete genome | blastn | 101 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium limnophilum | |
| 10418833 | 10418833 | PRJNA1111082_P_NODE_4869_length_356_cov_3.918728_g4824_i0 | PRJNA1111082 | 4869 | 356 | 3.918728 | 13.95067168 | Bacteroides ovatus | 28116 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|2032952970|gb|CP072244.1| | 28116 | g4824 | i0 | 100 | 22.6376404494382 | 356 | 0 | 100 | 0 | 1 | 356 | 5082741 | 5082386 | Bacteroides ovatus strain CL06T03C20 chromosome, complete genome | blastn | 8059 | 658 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides ovatus | |
| 11694084 | 11694084 | PRJNA1111082_P_NODE_7230_length_300_cov_2.255507_g7185_i0 | PRJNA1111082 | 7230 | 300 | 2.255507 | 6.766521 | Aquirufa lenticrescens | 2696560 | Bacteria | Bacteria | 520 | 6.36e-143 | NTclustered | gi|2091518249|gb|CP049834.1| | 2696560 | g7185 | i0 | 98.007 | 2.00666666666667 | 301 | 3 | 100 | 3 | 1 | 300 | 2503618 | 2503320 | Aquirufa lenticrescens strain 9H-EGSE chromosome, complete genome | blastn | 602 | 520 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa lenticrescens | |
| 11694121 | 11694121 | PRJNA1111082_P_NODE_8670_length_276_cov_1.251232_g8625_i0 | PRJNA1111082 | 8670 | 276 | 1.251232 | 3.45340032 | Hymenobacter sp. BRD128 | 2675878 | Bacteria | Bacteria | 259 | 1.39e-64 | NTclustered | gi|1847993467|gb|CP053908.1| | 2675878 | g8625 | i0 | 88.732 | 3.91666666666667 | 213 | 22 | 77 | 2 | 1 | 213 | 2405973 | 2406183 | Hymenobacter sp. BRD128 chromosome, complete genome | blastn | 1081 | 259 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. BRD128 | |
| 12969299 | 12969299 | PRJNA1111082_P_NODE_6891_length_307_cov_1.000000_g6846_i0 | PRJNA1111082 | 6891 | 307 | 1 | 3.07 | Runella sp. SP2 | 2268026 | Bacteria | Bacteria | 518 | 2.35e-142 | NTclustered | gi|1509191025|gb|CP031030.1| | 2268026 | g6846 | i0 | 97.068 | 1 | 307 | 9 | 100 | 0 | 1 | 307 | 2230249 | 2230555 | Runella sp. SP2 chromosome, complete genome | blastn | 307 | 518 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Runella | Runella sp. SP2 | |
| 14244063 | 14244063 | PRJNA1111082_P_NODE_11052_length_250_cov_0.881356_g11007_i0 | PRJNA1111082 | 11052 | 250 | 0.881356 | 2.20339 | Hymenobacter baengnokdamensis | 2615203 | Bacteria | Bacteria | 263 | 9.61e-66 | NTclustered | gi|1752950296|gb|CP044285.1| | 2615203 | g11007 | i0 | 86.555 | 0.952 | 238 | 32 | 95 | 0 | 1 | 238 | 17948 | 18185 | Hymenobacter baengnokdamensis strain BRD72 chromosome, complete genome | blastn | 238 | 263 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter baengnokdamensis | |
| 14244092 | 14244092 | PRJNA1111082_P_NODE_12232_length_244_cov_0.912281_g12187_i0 | PRJNA1111082 | 12232 | 244 | 0.912281 | 2.22596564 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 200 | 7.4299999999999985e-47 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g12187 | i0 | 91.667 | 0.590163934426229 | 144 | 12 | 59 | 0 | 1 | 144 | 865039 | 865182 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 144 | 200 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16792408 | 16792408 | PRJNA1111082_P_NODE_12674_length_242_cov_0.923077_g12629_i0 | PRJNA1111082 | 12674 | 242 | 0.923077 | 2.23384634 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 206 | 1.58e-48 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g12629 | i0 | 88.068 | 1.33057851239669 | 176 | 18 | 71 | 3 | 5 | 177 | 1622167 | 1621992 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 322 | 206 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 18066853 | 18066853 | PRJNA1111082_P_NODE_10055_length_256_cov_1.595628_g10010_i0 | PRJNA1111082 | 10055 | 256 | 1.595628 | 4.08480768 | Flavobacterium ammonificans | 1751056 | Bacteria | Bacteria | 200 | 7.85e-47 | NTclustered | gi|2119752067|dbj|AP025185.1| | 1751056 | g10010 | i0 | 81.857 | 1.8515625 | 237 | 43 | 93 | 0 | 19 | 255 | 1373490 | 1373254 | Flavobacterium ammonificans SHINM13 DNA, complete genome | blastn | 474 | 200 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammonificans | |
| 18066861 | 18066861 | PRJNA1111082_P_NODE_1055_length_668_cov_0.991597_g1012_i0 | PRJNA1111082 | 1055 | 668 | 0.991597 | 6.62386796 | Flavobacterium ammonificans | 1751056 | Bacteria | Bacteria | 1179 | 0 | NTclustered | gi|2119748049|dbj|AP025183.1| | 1751056 | g1012 | i0 | 98.503 | 3.95359281437126 | 668 | 10 | 100 | 0 | 1 | 668 | 876613 | 875946 | Flavobacterium ammonificans GENT11 DNA, complete genome | blastn | 2641 | 1179 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammonificans | |
| 19341113 | 19341113 | PRJNA1111082_P_NODE_11456_length_247_cov_1.793103_g11411_i0 | PRJNA1111082 | 11456 | 247 | 1.793103 | 4.42896441 | Flavobacterium ammonificans | 1751056 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2119752067|dbj|AP025185.1| | 1751056 | g11411 | i0 | 100 | 29.6437246963563 | 247 | 0 | 100 | 0 | 1 | 247 | 873026 | 873272 | Flavobacterium ammonificans SHINM13 DNA, complete genome | blastn | 7322 | 457 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammonificans | |
| 19341139 | 19341139 | PRJNA1111082_P_NODE_12696_length_242_cov_0.923077_g12651_i0 | PRJNA1111082 | 12696 | 242 | 0.923077 | 2.23384634 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 82.4 | 2.78e-11 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g12651 | i0 | 87.5 | 0.297520661157025 | 72 | 8 | 29 | 1 | 97 | 167 | 3775024 | 3775095 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 72 | 82.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19341186 | 19341186 | PRJNA1111082_P_NODE_2736_length_459_cov_4.318653_g2691_i0 | PRJNA1111082 | 2736 | 459 | 4.318653 | 19.82261727 | Lewinella sp. LCG006 | 3231911 | Bacteria | Bacteria | 322 | 3.07e-83 | NTclustered | gi|2773055173|gb|CP160680.1| | 3231911 | g2691 | i0 | 79.872 | 478.241830065359 | 467 | 73 | 99 | 20 | 1 | 457 | 792403 | 792858 | Lewinella sp. LCG006 chromosome, complete genome | blastn | 219513 | 322 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Lewinellaceae | Lewinella | Lewinella sp. LCG006 | |
| 19341370 | 19341370 | PRJNA1111082_P_NODE_8956_length_271_cov_2.954545_g8911_i0 | PRJNA1111082 | 8956 | 271 | 2.954545 | 8.00681695 | Flavobacterium ammonificans | 1751056 | Bacteria | Bacteria | 425 | 1.27e-114 | NTclustered | gi|2119752067|dbj|AP025185.1| | 1751056 | g8911 | i0 | 97.581 | 2.45756457564576 | 248 | 6 | 92 | 0 | 24 | 271 | 581444 | 581197 | Flavobacterium ammonificans SHINM13 DNA, complete genome | blastn | 666 | 425 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammonificans | |
| 20616383 | 20616383 | PRJNA1111082_P_NODE_10717_length_251_cov_1.567416_g10672_i0 | PRJNA1111082 | 10717 | 251 | 1.567416 | 3.93421416 | Flavobacterium sp. N2820 | 2986834 | Bacteria | Bacteria | 283 | 7.409999999999999e-72 | NTclustered | gi|2324023843|gb|CP110008.1| | 2986834 | g10672 | i0 | 88.462 | 61.3266932270916 | 234 | 27 | 93 | 0 | 1 | 234 | 2968693 | 2968460 | Flavobacterium sp. N2820 chromosome, complete genome | blastn | 15393 | 283 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. N2820 | |
| 22698186 | 22698186 | PRJNA1111082_P_NODE_10398_length_253_cov_0.866667_g10353_i0 | PRJNA1111082 | 10398 | 253 | 0.866667 | 2.19266751 | Flavobacterium | 237 | Bacteria | Bacteria | 71.3 | 6.34e-8 | NTclustered | gi|2496343437|gb|CP092332.1| | 1306518 | g10353 | i0 | 90.741 | 0.391304347826087 | 54 | 4 | 21 | 1 | 127 | 179 | 1489994 | 1489941 | Flavobacterium keumense strain K3R-10 chromosome, complete genome | blastn | 99 | 71.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium keumense | |
| 23167751 | 23167751 | PRJNA1111082_P_NODE_6319_length_318_cov_1.155102_g6274_i0 | PRJNA1111082 | 6319 | 318 | 1.155102 | 3.67322436 | Aquirufa antheringensis | 2516559 | Bacteria | Bacteria | 337 | 7.35e-88 | NTclustered | gi|2259823876|gb|CP049835.1| | 2516559 | g6274 | i0 | 90.837 | 2.12264150943396 | 251 | 23 | 99 | 0 | 65 | 315 | 450738 | 450988 | Aquirufa antheringensis strain 44A-TON chromosome, complete genome | blastn | 675 | 337 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa antheringensis | |
| 24441159 | 24441159 | PRJNA1111082_P_NODE_12040_length_245_cov_0.906977_g11995_i0 | PRJNA1111082 | 12040 | 245 | 0.906977 | 2.22209365 | Hymenobacter yonginensis | 748197 | Bacteria | Bacteria | 174 | 4.52e-39 | NTclustered | gi|2423912131|gb|CP115396.1| | 748197 | g11995 | i0 | 79.839 | 7.01224489795918 | 248 | 42 | 99 | 8 | 1 | 244 | 3732774 | 3733017 | Hymenobacter yonginensis strain KCTC 22745 chromosome, complete genome | blastn | 1718 | 174 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter yonginensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;