RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1111077" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111077 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9142577 9142577 PRJNA1111077_P_NODE_35908_length_242_cov_0.911243_g35687_i0 PRJNA1111077 35908 242 0.911243 2.20520806 Mytilus californianus 6549 Mollusca Mollusca 52.8 0.022   NTclustered gi|2334724280|ref|XR_007999694.1| 6549 g35687 i0 100 0.115702479338843 28 0 12 0 130 157 87 60 PREDICTED: Mytilus californianus uncharacterized LOC127737575 (LOC127737575), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
10418305 10418305 PRJNA1111077_P_NODE_31169_length_249_cov_2.863636_g30948_i0 PRJNA1111077 31169 249 2.863636 7.13045364 Dreissena polymorpha 45954 Mollusca Mollusca 56.5 0.002   NTclustered gi|2364391502|ref|XR_008043068.1| 45954 g30948 i0 94.595 0.14859437751004 37 0 15 1 107 143 1412 1446 PREDICTED: Dreissena polymorpha uncharacterized LOC127866694 (LOC127866694), ncRNA blastn 37 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
15048837 15048837 PRJNA1111077_P_NODE_29712_length_252_cov_1.720670_g29491_i0 PRJNA1111077 29712 252 1.72067 4.3360884 Metazoa 33208 Mollusca Mollusca 122 1.7199999999999995e-23   NTclustered gi|1397688525|ref|XR_003099086.1| 400727 g29491 i0 79.121 92.8015873015873 182 34 72 4 71 251 1716 1894 PREDICTED: Pomacea canaliculata uncharacterized LOC112563628 (LOC112563628), ncRNA blastn 23386 122 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
20615823 20615823 PRJNA1111077_P_NODE_23337_length_276_cov_1.216749_g23116_i0 PRJNA1111077 23337 276 1.216749 3.35822724 Argopecten irradians 31199 Mollusca Mollusca 52.8 0.025   NTclustered gi|2835348096|ref|XR_011205747.1| 31199 g23116 i0 100 0.101449275362319 28 0 10 0 207 234 2910 2937 PREDICTED: Argopecten irradians uncharacterized lncRNA (LOC138305976), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;