RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1111077" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1021058 1021058 PRJNA1111077_P_NODE_29321_length_253_cov_3.744444_g29100_i0 PRJNA1111077 29321 253 3.744444 9.47344332 Spizellomyces 4815 Fungi Fungi 363 9.339999999999996e-96   NTclustered gi|268636534|gb|FJ827676.1| 117818 g29100 i0 92.52 100.517786561265 254 18 100 1 1 253 27 280 Spizellomyces dolichospermus voucher DAOM BR 346 28S ribosomal RNA gene, partial sequence blastn 25431 363 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces dolichospermus
15517732 15517732 PRJNA1111077_P_NODE_7793_length_417_cov_2.133721_g7572_i0 PRJNA1111077 7793 417 2.133721 8.89761657 Piromyces sp. 45796 Fungi Fungi 556 6.97e-154   NTclustered gi|1388116266|gb|MH043820.1| 45796 g7572 i0 100 86.9136690647482 301 0 72 0 1 301 282 582 Piromyces sp. strain B5 Glycosyl hydrolase family 43 mRNA, partial cds blastn 36243 556 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;