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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA1111077" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111077 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
214549 214549 PRJNA1111077_P_NODE_19841_length_287_cov_2.289720_g19620_i0 PRJNA1111077 19841 287 2.28972 6.5714964 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 255 1.88e-63   NTclustered gi|2258818259|gb|CP060220.1| 2026715 g19620 i0 84.588 94.2160278745645 279 19 90 11 1 257 3251917 3251641 MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome blastn 27040 255 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
4041867 4041867 PRJNA1111077_P_NODE_5284_length_497_cov_4.030660_g5063_i0 PRJNA1111077 5284 497 4.03066 20.0323802 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 580 5.0099999999999984e-161   NTclustered gi|2258818259|gb|CP060220.1| 2026715 g5063 i0 88.129 169.195171026157 497 47 100 7 1 497 3250864 3251348 MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome blastn 84090 580 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
6593308 6593308 PRJNA1111077_P_NODE_9706_length_377_cov_4.983553_g9485_i0 PRJNA1111077 9706 377 4.983553 18.78799481 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 307 6.940000000000001e-79   NTclustered gi|2258818259|gb|CP060220.1| 2026715 g9485 i0 92.166 156.954907161804 217 17 95 0 161 377 3250967 3250751 MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome blastn 59172 307 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
7867443 7867443 PRJNA1111077_P_NODE_23967_length_273_cov_4.435000_g23746_i0 PRJNA1111077 23967 273 4.435 12.10755 Peredibacter starrii 28202 Bacteria Bacteria 327 3.72e-85   NTclustered gi|2631252187|gb|CP139487.1| 28202 g23746 i0 88.278 183.282051282051 273 32 100 0 1 273 132534 132806 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 50036 327 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
9142680 9142680 PRJNA1111077_P_NODE_5208_length_500_cov_5.304450_g4987_i0 PRJNA1111077 5208 500 5.30445 26.52225 Peredibacter starrii 28202 Bacteria Bacteria 852 0   NTclustered gi|2631252187|gb|CP139487.1| 28202 g4987 i0 97.4 125.046 500 13 100 0 1 500 511200 510701 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 62523 852 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
12969020 12969020 PRJNA1111077_P_NODE_8571_length_399_cov_3.702454_g8350_i0 PRJNA1111077 8571 399 3.702454 14.77279146 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 449 1.1599999999999999e-121   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g8350 i0 87.186 193.992481203008 398 47 99 4 4 399 3447556 3447951 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 77403 449 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
15517070 15517070 PRJNA1111077_P_NODE_15993_length_310_cov_2.485232_g15772_i0 PRJNA1111077 15993 310 2.485232 7.7042192 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 172 2.13e-38   NTclustered gi|2258818259|gb|CP060220.1| 2026715 g15772 i0 87.838 19.5677419354839 148 17 48 1 162 309 3251700 3251846 MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome blastn 6066 172 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
18066274 18066274 PRJNA1111077_P_NODE_20675_length_284_cov_3.331754_g20454_i0 PRJNA1111077 20675 284 3.331754 9.46218136 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 414 2.8999999999999993e-111   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g20454 i0 93.007 218.735915492958 286 17 100 3 1 284 3446166 3446450 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 62121 414 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
18872574 18872574 PRJNA1111077_P_NODE_13195_length_326_cov_4.252964_g12974_i0 PRJNA1111077 13195 326 4.252964 13.86466264 Bdellovibrio 958 Bacteria Bacteria 287 7.72e-73   NTclustered gi|2800924434|gb|CP168967.1| 959 g12974 i0 83.882 28.7668711656442 304 46 93 3 1 303 784226 784527 Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome blastn 9378 289 0.993079584775087 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
19340292 19340292 PRJNA1111077_P_NODE_12956_length_329_cov_6.285156_g12735_i0 PRJNA1111077 12956 329 6.285156 20.67816324 Peredibacter starrii 28202 Bacteria Bacteria 556 5.38e-154   NTclustered gi|2631252187|gb|CP139487.1| 28202 g12735 i0 97.256 96.838905775076 328 9 99 0 1 328 512475 512148 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 31860 556 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
20616114 20616114 PRJNA1111077_P_NODE_35357_length_243_cov_0.905882_g35136_i0 PRJNA1111077 35357 243 0.905882 2.20129326 Bdellovibrio sp. SKB1291214 1732569 Bacteria Bacteria 156 1.6200000000000002e-33   NTclustered gi|2328635023|gb|CP106855.1| 1732569 g35136 i0 79.817 0.897119341563786 218 40 89 4 20 235 247414 247199 Bdellovibrio sp. SKB1291214 chromosome, complete genome blastn 218 156 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. SKB1291214
21891387 21891387 PRJNA1111077_P_NODE_19038_length_290_cov_1.354839_g18817_i0 PRJNA1111077 19038 290 1.354839 3.9290331 Bacteriovorax sp. HI3 2984118 Bacteria Bacteria 531 2.83e-146   NTclustered gi|2321225508|dbj|AP026946.1| 2984118 g18817 i0 99.655 198.410344827586 290 1 100 0 1 290 262210 262499 Bacteriovorax sp. HI3 DNA, complete genome blastn 57539 531 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp. HI3
21891516 21891516 PRJNA1111077_P_NODE_24418_length_272_cov_1.396985_g24197_i0 PRJNA1111077 24418 272 1.396985 3.7997992 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 137 6.7e-28   NTclustered gi|578016248|gb|CP002190.1| 765869 g24197 i0 76.19 1.00367647058824 273 58 99 6 3 270 2868082 2868352 Bdellovibrio bacteriovorus W, complete genome blastn 273 137 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
21891808 21891808 PRJNA1111077_P_NODE_3598_length_588_cov_7.456311_g3378_i0 PRJNA1111077 3598 588 7.456311 43.84310868 Peredibacter sp. HCB2-198 3383025 Bacteria Bacteria 920 0   NTclustered gi|2867657404|gb|CP174607.1| 3383025 g3378 i0 98.286 130.605442176871 525 9 100 0 64 588 1292809 1292285 Peredibacter sp. HCB2-198 chromosome, complete genome blastn 76796 920 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter sp. HCB2-198

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;